TeachingWs10CAMPLecture

Chair for Computer Aided Medical Procedures & Augmented Reality
Lehrstuhl für Informatikanwendungen in der Medizin & Augmented Reality

Computer Aided Medical Procedures (CAMP) - IN2021

  Lecture by Prof. Dr. Nassir Navab & invited speakers.

Module IN2021: 4+0 SWS, 6 ECTS, Praktische Informatik, Wahlfach

Time & Location:

Further information:

Abstract

Computer science is playing an important, increasing role in medical practices. Medical imaging companies are no more asked by physicians to only produce images of anatomy. Instead, they are asked to design software and hardware systems to provide complex computer-aided solutions for diagnosis, intervention and therapy. There are more and more opportunities for computer science graduates to contribute to the development and deployment of medical solutions. Within the operating rooms, there is an increasing need for the integration and visualization of heterogeneous data acquired by numerous sensors.

This course on computer aided medical procedures exposes the students to the challenges of building the operating rooms of the future. The main focus of the course is in imaging technologies especially intra-operative imaging as well as the visualization of this data. Techniques like segmentation and registration will be explained in various classes.

There will be invited guests from the hospital Rechts der Isar and also medical companies in the classes. They will talk about the physical properties and the clinical use of the different modalitries and techniques. The invited guests will be announced in the course schedule below.

Here is a rough overview of the topics that were presented in last year's lecture:

  • Introduction
  • Computer-Aided Surgery and Exemplary Applications
  • Image Processing and Segmentation
  • Registration
  • Basics of Tracking Technologies
  • Visualization and Medical Augmented Reality
  • Surgical Workflow - Analysis, Monitoring and Applications
  • Basics of Radiography (X-Ray, CT etc.) - Physical Properties, Applications, Radiation Therapy
  • Magnetic Resonance Imaging - Basics, Advanced MRI and Applications
  • Ultrasound Imaging
  • Nuclear Medicine (PET/SPECT)

For a more detailed overview, see last year's lecture.

Prerequisites:

  • Interest in medical image processing

Benefits:

  • Knowledge in medical image acquisition / image modalities
  • Deep insight into medical image computing

This lecture is going to be succeeded by "Computer Aided Medical Procedures 2" (see summer term 2010 CAMP 2 lecture page) (2+2 SWS, 6 ECTS) in the next summer term (which is recommended, but not obligatory).

Course Registration

ALERT! Please fill in this as soon as possible.

Alternatively, you can write an email to Athanasios Karamalis providing the following information: first name, last name, email address, study program, semester, and which other lectures your are attending at this chair (CAMP2, 3DCV, etc.). Please use the following line as the subject: "[CAMP-1 Lecture] Registration". We will send you a confirmation email - in case you do not receive any confirmation email within approximately one week, please contact us again. Your registration is not binding but enables us to send you information about changes in schedule in the future.

Course Schedule

A password is needed to access the lecture slides and materials. This will be announced in the first lecture.

Date Type Topic Speaker Materials
Tue, Oct 19 CAMP Introduction 1 Prof. Dr. Nassir Navab Introduction 1
Thu, Oct 21 CAMP Introduction 2 - Brief History of Radiology Prof. Dr. Nassir Navab Radiology History
Tue, Oct 26 CAMP Image Processing and Segmentation 1 Nicolas Brieu Image Segmentation 1
Thu, Oct 28 CAMP Image Processing and Segmentation 2 Jakob Vogel Image Segmentation 2
Tue, Nov 2 CAMP Image Processing and Segmentation 3 Nicolas Brieu Image Segmentation 3
Thu, Nov 4 Trip Field Trip to Siemens AG Healthcare (see information below) Siemens AG Healthcare -
Tue, Nov 9 Invited Cone-Beam Reconstruction Dr. Günter Lauritsch, Siemens AG Healthcare Cone-Beam Reconstruction
Thu, Nov 11 Invited Ultrasound Imaging Dr. Marcus Schreckenberg, TomTec GmbH Ultrasound Imaging
Tue, Nov 16 Invited Magnetic Resonance Imaging - Basics and Applications Dr. Stephan Nekolla, Nuklearmedizinische Klinik, Klinikum r. d. Isar MRI - Basics and Applications
Thu, Nov 18 Invited Magnetic Resonance Imaging - Advanced MRI Dr. Stephan Nekolla, Nuklearmedizinische Klinik, Klinikum r. d. Isar MRI - Advanced MRI
Tue, Nov 23 Invited Physical Properties of Radiation with Applications in X-Ray and Radiation Therapy Prof. Dr. Peter Kneschaurek, Klinik für Strahlentherapie, Klinikum r. d. Isar Physics of Radiation
Thu, Nov 25 Invited Nuclear Medicine (PET/SPECT) Ralph Bundschuh, Nuklearmedizinische Klinik, Klinikum r. d. Isar Nuclear Medecine
Tue, Nov 30 CAMP Basics of Transformations Loren Schwarz Basics of Transformations
  Invited Cardiovascular Reconstruction Prof. Dr.-Ing. Joachim Hornegger Cardiovascular Reconstruction
Thu, Dec 2 - Dies academicus (no class) - -
Tue, Dec 7 Trip Field Trip to Nuklearmedizinische Klinik, Klinikum r. d. Isar (see information below) Nuklearmedizinische Klinik, Klinikum r. d. Isar -
Thu, Dec 9 CAMP Registration 1: Intensity-based registration Christian Wachinger Registration 1
Tue, Dec 14 CAMP Registration 2: Feature-based registration Dr. Martin Groher Registration 2
Thu, Dec 16 Invited 3D/2D registration for image guided interventions and the problem of validation Prof. Franjo Pernuš, PhD, University of Ljubljana, Slovenia 3D/2D Registration (1) , 3D/2D Registration (2)
Tue, Dec 21 CAMP Registration 3: Deformable registration Loren Schwarz Deformable Registration
Thu, Dec 23 - Merry Christmas! (no classes until Jan 11) - -
Tue, Jan 11 CAMP Computer-Aided Surgery and Exemplary Applications Prof. Dr. Nassir Navab AR Laparoscopic Surgery ,CAI,Fluroscopic Navigation
Thu, Jan 13 Invited High Tech Medical Device Startup: Essential Difference between Development for Market and Science Stefan Wiesner, SurgicEye GmbH Medical Device StartUp
Tue, Jan 18 CAMP Intraoperative Tracking and Tool Calibration Tobias Reichl Tracking
Thu, Jan 20 Trip Field Trip to BrainLAB AG (see information below) BrainLAB AG -
Tue, Jan 25 CAMP Medical Augmented Reality - Definition and State of the Art Prof. Dr. Nassir Navab Medical AR
Thu, Jan 27 Invited Registration-Free Navigation for Surgery Prof. Dr. med. Ekkehard Euler, Chirurgische Klinik, Klinikum Innenstadt Registration-Free Navigation (1), CAMC (2)
Tue, Feb 1 CAMP Visualization and Medical Augmented Reality Christoph Bichlmeier Visualization and Medical AR
Thu, Feb 3 Invited Motion analysis for epilepsy patients Prof. Dr. med. Soheyl Noachtar, Department of Neurology, Klinikum der Universität München Not relevant for the exam Epileptology
Tue, Feb 8 Invited Medical Robotics and Image Guided Surgery Research at Imperial College, London Prof. Guang-Zhong Yang Not relevant for the exam
Thu, Feb 10 Trip Demo Session at NARVIS-Lab (see information below) Christoph Bichlmeier, Lejing Wang  
Thu, Feb 17 - Exam 1 (see information below) Tobias Reichl, Athanasios Karamalis -
Tue, Apr 26 - Exam 2 (see information below) Tobias Reichl, Athanasios Karamalis -

Field Trips

Within the CAMP lecture, we try to bring students into contact with industrial leaders providing computer-aided medical systems and software. We plan to arrange the following trips for this lecture. Please note that other lectures overlapping with the field trip days will not be canceled or repeated.

Siemens AG Healthcare

Date: Thu, Nov 4 2010

There will be a half-day field trip to Siemens AG Healthcare in Erlangen. A bus will be provided, bringing students from TUM Garching to the Siemens site and back. The two Siemens sites in Erlangen and Forchheim serve as research and production sites for CT (Computed Tomography), AX (Angiography / X-Ray), MR (Magnetic Resonance Imaging), and SP (Special Products).

Schedule:

  • 11:00 sharp: Meet at the Garching parking lot
  • 11:15-13:45: Transfer to Siemens MR/SP, Erlangen
  • 14:00-14:30: Introduction to Siemens Healthcare
  • 14:30-15:00: Working oppertunities in Siemens Healthcare
  • 15:00-16:00: SYNGO: medical image information system
  • 16:00-17:00: Magnetic Resonance, Visit of the MR factory
  • 17:00-19:00: Return transfer to Garching

Registration:

  • The field trip is free of charge, but the number of persons is limited.
  • To confirm the registration, a 20 Euros deposit is needed. It will be given back on the bus to Siemens.

Nuklearmedizinische Klinik, Klinikum r. d. Isar

Date: Tue, Dec 7 2010

There will be a half-day field trip to Nuklearmedizinische Klinik, Klinikum r. d. Isar.

Schedule:

  • 13:30 sharp Meet at Nuklearmedizinische Klinik, Klinikum r. d. Isar in the lobby of the front entrance Ismaninger Straße 22 Google map

  • 13:45-14:25 Talk: Extended Image Registration (Laszlo Papp, MEDISO Medical Imaging Systems GmbH)
  • 14:30-15:10 Talk: Individualized Cancer Medicine: Link from imaging to therapy
  • short break
  • 15:25-16:10 Nuclear Medicine: Cyclotron + PET Machine, PET data analysis
  • 16:20-17:05 Radiation Therapy: Linac, Tomotherapy, Treatment planning
  • 17:15-18:00 Radiology

Registration:

  • The field trip is free of charge, but the number of persons is limited.
  • To confirm the registration, a 10 Euros deposit is needed. It will be given back at the meeting point at Nuclear Medicine.

BrainLab AG

Date: Thu, Jan 20 2011

There will be a half-day field trip to BrainLAB AG. BrainLAB provides advanced radiotherapy, radiosurgery, neurosurgery, orthopedic and ENT surgery products, services, and software solutions worldwide. Students of the Biomedical Computing Master program are supposed to take part in another, but identical trip to BrainLAB with the lecture "Computer Assisted Trauma Surgery" instead of this trip here!

We will meet directly at BrainLAB at 12:45pm sharp. We cannot provide a bus for this field trip, so you have to get there by yourselves (you can share cars or go by public transport). The address is BrainLAB AG, Kapellenstr. 12, 85622 Feldkirchen. For directions to BrainLAB have look at this instructions on the BrainLAB website.

Schedule

Registration:

  • The field trip is free of charge, but the number of persons is limited.
  • To confirm the registration, a 10 Euros deposit is needed. It will be given back at the meeting point at BrainLAB.

NARVIS Lab Tour

Date: Thu, Feb 10 2011, Time 3pm-5:30pm

Meeting point: Directly at the NARVIS Lab.

Follow the "NARVIS" signs and/or these directions:

  • After entering the building (Nussbaumstr. 20) use the staircase on the left side. At the staircase you will find signs leading you to the lab
  • Inside the building look for Station 3, which is in the second floor. In the same floor you'll find the NARVIS room (C2.06)

The tour will be given by Christoph Bichlmeier and Lejing Wang.

Exams

There will be two exams, with the second primarily being the "repeat exam" for the first.

Time & Location:

  1. Thu, Feb 17 2011, 11:30-13:30, MW 1050 (Johann-Bauschinger-Zeichensaal)
  2. Tue, Apr 26 2011, 15:00-17:00, MI HS2 (MI 00.04.011)

Details:

  • Type: written, closed book (i.e. no material allowed), approx. 90 minutes
  • Information about exam procedure: Merkblatt zur Klausurdurchführung (in German only, English version to come)
  • Grading of the exam:
    • Approx. 80% for questions and problems to solve on the CAMP lectures.
    • Approx. 20% for questions on invited talks.
    • No questions about the field trips.
  • The exam results will be published at TUM-Online.

Registration:

  • Please register via TUM-Online under German title "Informatikanwendungen in der Medizin" (IN2021)
  • In case you can not (for any reason) register via TUM-Online, register personally at the Infopoint for Informatics Students (MI 00.10.013).
  • You are free to skip the first exam and directly register for the second exam, but in this case note that there will no further repeat exam in the summer term!

Literature

Primary Literature

Secondary Literature


TeachingForm
Title: Computer Aided Medical Procedures
Professor: Prof. Dr. Nassir Navab
Tutors: Tobias Reichl, Athanasios Karamalis
Type: Lecture
Information: 4 + 0 SWS, 6 ECTS Credits (Module IN 2021)
Term: 2010WiSe
Abstract: Computer science is playing an important, increasing role in medical practices. Medical imaging companies are no more asked by physicians to only produce images of anatomy. Instead, they are asked to design software and hardware systems to provide complex computer-aided solutions for diagnosis, intervention and therapy. There are more and more opportunities for computer science graduates to contribute to the development and deployment of medical solutions. Within the operating rooms, there is an increasing need for the integration and visualization of heterogeneous data acquired by numerous sensors. This course on computer aided medical procedures exposes the students to the challenges of building the operating rooms of the future. The main focus of the course is in imaging technologies especially intra-operative imaging as well as the visualization of this data. Techniques like segmentation and registration will be explained in various classes. There will be invited guests from the hospital Rechts der Isar and also medical companies in the Thursday classes. They will talk about the physical properties and the clinical use of the different modalitries and techniques. The invited guests will be announced in the course schedule below.


Edit | Attach | Refresh | Diffs | More | Revision r1.92 - 09 May 2011 - 09:15 - AthanasiosKaramalis

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