Computer Aided Medical Procedures I

Administrative Information Responsible for Module: Prof. Nassir Navab Organization: Dr. Seong Tae Kim, Dr. Ulrich Eck, and Dr. Thomas Wendler Time Tuesdays at 2:15pm - 4:00pm, in MI Hörsaal 2 Thursday at 2:00pm - 4:00pm, in MI Hörsaal 2 Overview Computer science is playing an important, increasing role in medical practices. Medical imaging companies are no more asked by physicians to only produce images of anatomy. Instead, they are asked to design software and hardware systems to provide complex computer-aided solutions for diagnosis, intervention and therapy. There are more and more opportunities for computer science graduates to contribute to the development and deployment of medical solutions. Within the operating rooms, there is an increasing need for the integration and visualization of heterogeneous data acquired by numerous sensors. This course on computer aided medical procedures (CAMP I) exposes the students to the challenges of building the operating rooms of the future. The main focus of the course is in imaging technologies especially intra-operative imaging as well as the visualization of this data. Techniques like segmentation and registration will be explained in various classes. CAMP I will be continued in the summer semester with the lecture CAMP II which focusses an advanced concepts such as ultrasound imaging, machine learning, etc. Course Schedule Date Time Room Type Lecturer Material Thu. 17/10/2019 14:00 - 16:00 MI HS2 Lecture - Introduction & Opening Dr. Seong Tae Kim  slides Tue. 22/10/2019 14:15 - 16:00 MI HS2 Lecture - Image transformation Dr. Ulrich Eck  slides,  Intro to Python Thu. 24/10/2019 14:00 - 16:00 MI HS2 Exercise - Image transformation Alexander Winkler  Exercise00,  Solution00,  Exercise01,  Solution01,  Exercise02,  Solution02 Tue. 29/10/2019 14:15 - 16:00 MI HS2 Lecture - A brief History of Radiology Prof. Nassir Navab  slides Thu. 31/10/2019 14:00 - 16:00 MI HS2 Lecture - Computed tomography 1/2 Dr. Wolfgang Wein  slides Tue. 5/11/2019 14:15- 16:00 MI HS2 Lecture - Computed tomography 2/2 Dr. Wolfgang Wein  slides Thu. 7/11/2019 14:00 - 16:00 MI HS2 Lecture - Image Filtering Dr. Seong Tae Kim  slides Tue. 12/11/2019 14:15 - 16:00 MI HS2 Exercise - Image filtering Roger Soberanis  Exercise_Filtering,  Exercise_Filtering-sol Thu. 14/11/2019 14:00 - 16:00 MI HS2 Lecture - Advanced Image Filtering and Applications Sai Gokul Hariharan  slides Tue. 19/11/2019 14:15 - 16:00 MI HS2 Lecture - Image Segmentation Dr. Seong Tae Kim  slides Thu. 21/11/2019 14:00 - 16:00 MI HS2 Exercise - Image Segmentation Roger Soberanis  Exercise_Segmentation,  Exercise_Segmentation-sol Tue. 26/11/2019 14:15 - 16:00 MI HS2 Lecture - Advances in Image Segmentation Hasan Sarhan  slides Thu. 28/11/2019 14:00 - 16:00 MI HS2 Lecture - Intensity-Based Registration Prof. Nassir Navab  slides Tue. 3/12/2019 15:00 - 18:00 NARVIS NARVIS Lab Visit Dr. Ulrich Eck  slides Thu. 5/12/2019 14:00 - 16:00 MI HS2 Exercise - Intensity-Based Registration Matthias Grimm  Exercise_IntensityBasedRegistration,  Exercise_IntensityBasedRegistrationSolution Tue. 10/12/2019 14:15 - 16:00 MI HS2 Lecture - Magnetic resonance imaging 1/2 Dr. Stephan Nekolla  slides Thu. 12/12/2019 14:00 - 16:00 MI HS2 Lecture - Magnetic resonance imaging 2/2 Dr. Stephan Nekolla  slides Tue. 17/12/2019 14:15 - 16:00 MI HS2 Lecture - Tomosynthesis: Application to Breast Imaging Dr. Seong Tae Kim  slides Thu. 19/12/2019 18:30 - 19:30 MI HS1 Mid-term exam Dr. Seong Tae Kim, Dr. Ulrich Eck   Tue. 7/1/2020 14:15 - 16:00 MI HS2 Lecture - Ultrasound Imaging Dr. Christoph Hennersperger  slides Thu. 9/1/2020 14:00 - 16:00 MI HS2 Lecture - Ultrasound Imaging Dr. Christoph Hennersperger  slides Tue. 14/1/2020 14:15 - 16:00 MI HS2 Exercise - Ultrasound Imaging Walter Simson  Exercise_Ultrasound Solution_Ultrasound Thu. 16/1/2020 14:00 - 16:00 MI HS2 Lecture - Feature-Based Image Registration Prof. Nassir Navab  slides Tue. 21/1/2020 14:15 - 16:00 MI HS2 Exercise - Feature-Based Image Registration Javier Esteban  Exercise_Feature_Registration Feature_Registration_Solution Thu. 23/1/2020 14:00 - 16:00 MI HS2 Lecture - Registration for image-guided medical interventions Matthias Grimm  slides Tue. 28/1/2020 14:15 - 16:00 MI HS2 Lecture - Nuclear Imaging (1/2) Dr. Thomas Wendler  slides Thu. 30/1/2020 14:00 - 16:00 MI HS2 Lecture - Nuclear Imaging (2/2) Dr. Thomas Wendler  slides Tue. 4/2/2020 14:15 - 16:00 MI HS2 Lecture - Optical Imaging Dr. Thomas Wendler  slides Thu. 6/2/2020 14:00 - 16:00 MI HS2       Thu. 20/2/2020 13:30 - 15:00 Ernst-Schmidt-Hörsaal Final Exam Dr. Seong Tae Kim, Dr. Ulrich Eck   Tue. 10/3/2020 15:00 - 18:00 03.13.056 Final Exam Inspection Dr. Seong Tae Kim, Dr. Ulrich Eck, Dr. Thomas Wendler   Mon. 29/6/2020 08:15 - 09:45 0.002, Tentomax HS2 (5538.EG.002) Repeat Exam (bring your mouth-and-nose cover with you! it is mandatory) Dr. Seong Tae Kim, Dr. Ulrich Eck, Dr. Thomas Wendler   Exercises All programming exercises will be conducted in python 3. More specifically, we will rely on the ANACONDA distribution. In addition to this, we recommend you to install PyCharm as IDE. Literature [1] Numpy for Matlab users TeachingForm Title: Computer Aided Medical Procedures I Professor: Prof. Nassir Navab, Dr. Seong Tae Kim,Dr. Ulrich Eck, Dr. Thomas Wendler Tutors:   Type: Lecture Information: IN2021, 2SWS lecture, 2SWS exercise (6 ECTS) Term: 2019WiSe Abstract:   Edit | Attach | Refresh | Diffs | More | Revision r1.59 - 28 Jun 2020 - 16:43 - UlrichEck Lehrstuhl für Computer Aided Medical Procedures & Augmented Reality