by Prof. Nassir Navab and Dr. Benjamin Frisch
Tutors: Felix Achilles, Oliver Zettinig, Rüdiger Göbl
Type: Master Practical Course Module IN2106, Module IN8902, Module IN4136
SWS: 6
Programs: Biomedical Computing (Master), Informatics (Master), Informatics (Diploma)
ECTS: 10 Credits
Preliminary Meeting ("Vorbesprechung"):
Further Meetings: See schedule below
This course in TUMOnline: Link
The course will be conducted in English.
Please register in the matching system for the course registration between 29JAN2016 and 09FEB2016 (link). Keep in mind that your chances to be assigned to the course increase if you give it a higher rank in your choices. We will give highest priority for this course for students of the Biomedical Computing Master (BMC) who are in their last semester, take this course for the first time and send an e-mail to benjamin.frisch@tum.de before 03FEB2016. For further details about how the matching system works and its schedule please check this website.
Date | Place | Topic | Conducted by | Materials |
---|---|---|---|---|
29 JAN 2016, 1000-1100 | MI 03.13.010 | Preliminary meeting ("Vorbesprechung") | Dr. Benjamin Frisch | ![]() |
12 APR 2016, 0830-1000 | MI 03.13.010 | Introductory Meeting: Organizational Issues, Project Announcements | Dr. Benjamin Frisch | ![]() ![]() |
13 APR 2016, 09000-1200 | MI 03.13.010 | Lecture: Software Project Management (SPM) + Presentation Tips | Shadi Albarqouni and Dr. Benjamin Frisch | ![]() ![]() |
14 APR 2016, 1700 | Deadline to send project preferences. Assignments published later this evening. | Seminar Participants | ||
19 APR 2016, 0830-1000 | MI 03.13.010 | Lecture: Unified Modeling Language (UML) | Rüdiger Göbl | ![]() |
20 APR 2016, 0900-1200 | MI 03.13.010 | Lecture: Documentation, Tests, Design Patterns & Integration Strategy | Oliver Zettinig | ![]() |
22 APR 2016, 1300-1600 | MI 03.13.010 | Project Requirements Presentations | Seminar Participants | |
Four weeks of no session. | ||||
23 MAY 2016, 1430-1730 | IFL | Intermediate Presentations Part I | Seminar Participants | |
24 MAY 2016, 1430-1730 | IFL | Intermediate Presentations Part II | Seminar Participants | |
Five weeks of no session. | ||||
04 JUL 2016, 1400-1500 | MI 03.13.010 | Q&A Final Presentations | Course Tutors | |
CANCELLED | CANCELLED | Final Presentations Part I | Course Tutors, Seminar Participants | |
13 JUL 2016, 0800-1230 | MI 03.13.010 | Final Presentations | Course Tutors, Seminar Participants |
13JUL2016. 10 minutes slot for each presenter (plus 3 minutes for questions). Your presentation has to last at least 9 minutes. It should last 10 minutes. You will be interrupted after 10 minutes 20 seconds, no exceptions made.
Slot | Name |
---|---|
1 | El-Gazzar |
2 | Kalim |
3 | Navarro |
4 | Jimenez Sanchez |
5 | Luque Gonzalez |
6 | Stelzl |
7 | Sarasua |
8 | Yajnik |
9 | Page |
10 | Nitkunanantharajah |
11 | Nikolaev |
12 | Tran |
13 | Kewlani |
14 | Ahmad |
23MAY2016, 1430-1730, at IFL. 7 minutes slot for each presenter (plus 3 minutes for questions). Your presentation has to last at least 6 minutes and 30 seconds. It should last 7 minutes. You will be interrupted after 7 minutes 20 seconds, no exceptions made.
Slot | Name |
---|---|
1 | Luque Gonzalez |
2 | Nitkunanantharajah |
3 | Kalim |
4 | Yajnik |
5 | El-Gazzar |
6 | Stelzl |
7 | Nikolaev |
8 | Jimenez Sanchez |
24MAY2016, 1430-1730, at IFL. 7 minutes slot for each presenter (plus 3 minutes for questions). Your presentation has to last at least 6 minutes and 30 seconds. It should last 7 minutes. You will be interrupted after 7 minutes 20 seconds, no exceptions made.
Slot | Name |
---|---|
1 | Navarro |
2 | Ahmad |
3 | Page |
4 | Kewlani |
5 | Abdo |
6 | Tran |
7 | Sarasua |
22 APR 2016, 1300-1600, in room MI 03.13.010. 5 minutes slot for each presenter (plus 2 minutes for questions). Your presentation will be interrupted after 5 minutes 20 seconds, no exceptions made.
You can use the CAMP PowerPoint template for your slides.
Projects will be announced in due time and presented during the introductory meeting. Please communicate your selection (first, second and third choice) by 14APR2016, 1700.
ID | Student | Project Title | Supervisor | Additional Material ![]() |
---|---|---|---|---|
1 | El-Gazzar | A vision based anthropometric Scanner | Benjamin Busam | ![]() |
2 | Kalim | A hybrid opto-inertial Tracking System Prototype | Benjamin Busam | ![]() |
3 | A virtual multi-view Optical Tracking System | Benjamin Busam | ![]() | |
4 | Nikolaev | Simulation of PET detectors based on continuous crystals using GATE | Jorge Cabello | ![]() |
5 | Nitkunanantharajah | Anisotropic PET filtering with MRI | Jorge Cabello | ![]() |
6 | Stelzl | Advanced Visualization for Magnetic Resonance Spectroscopic Imaging | Eduardo Coello | ![]() |
7 | Tran | Deep Learning for Biomedicine | Vladimir Golkov | ![]() |
8 | Statistical Methods and Machine Learning for Diffusion MRI | Vladimir Golkov | ![]() | |
9 | Super-Resolution of Cryo-EM using Convolutional Neural Networks | Vladimir Golkov | ![]() | |
10 | Navarro | Computer assisted optical biopsy for colorectal polyps | Diana Mateus | ![]() |
11 | Jimenez Sanchez | Fully convolutional model for brain tumor segmentation | Fausto Milletari | ![]() |
12 | Abdo | Color normalization Fiji/ImageJ Plugin for Histological images | Tingying Peng | ![]() |
13 | Luque Gonzalez | Prostate Cancer Metastases Atlas | Julia Rackerseder | ![]() |
14 | Ahmad | 3D PSMA-PET/MR Histology Registration | Julia Rackerseder | ![]() |
15 | Frequency Analysis of Intra-Abdominal Pressure in Laparoscopic Surgeries | Ralf Stauder | ![]() | |
16 | Yajnik | Medical Workflow Software Infrastructure Based on Business Workflow Modeling Standards | Ralf Stauder | ![]() |
17 | Sarasua | Surgical Instrument Tracking in Minimally Invasive Robotic Surgery | Florian Steidle | ![]() |
18 | Advanced UI for Autonomous Robotic Ultrasound | Salvatore Virga | ![]() | |
19 | Automated contour definition in cardiac MRI revisited: assessment of regional contrast media uptake | Stephan Nekolla | ![]() | |
20 | Kewlani | A texture analysis plug‐in for a multi-modal, multi parametric analysis package (M3P‐Anima) | Stephan Nekolla | ![]() |
22 | Deep Learning for QSAR | Vladimir Golkov | ![]() | |
21 | Page | Intraoperative robotic SPECT reconstruction | Marco Esposito | TBD |
TeachingForm | |
---|---|
Title: | Project Management and Software Development for Medical Applications |
Professor: | Prof. Nassir Navab and Dr. Benjamin Frisch |
Tutors: | Felix Achilles, Oliver Zettinig, Rüdiger Göbl |
Type: | Praktikum |
Information: | 6 SWS, 10 ECTS Credits |
Term: | 2016SoSe |
Abstract: |