Olivier Pauly

Olivier Pauly Dr.rer.nat. E-Mail: Phone: +49 89 289 19437 Address: Technische Universität München Fakultät für Informatik, I-16 Boltzmannstr. 3 85748 Garching b. München Germany Room: MI 03.13.043 Research interests Active research projects News Publications Workshops Teaching Student Supervision Background Research interests Machine learning in medical applications Pattern recognition and analysis Medical image understanding Tissue classication Computer aided diagnosis Similarity, metric, distance learning Active research projects

News 25.05.2013 : We have one paper accepted at MICCAI conference. 10.05.2013 : We have two oral presentation at 3DV conference. 01.05.2013 : I started as an Application Developer @ Definiens, AG 30.08.2012 : Ph.D. Defense successfully achieved 27.07.2012 : Ph.D. Defense scheduled on Thursday 30th of August. 23.07.2012 : One journal paper accepted in Ultrasound Med Biol. 15.07.2012 : One paper accepted at MICCAI workshop Medical Computer Vision. 01.07.2012 : We have one paper accepted to MICCAI and one paper to ECCV. 01.03.2012 : We have open Master thesis topics (see description below). If you are interested, please send me an email or come by to my office. 29.12.2011 : I submitted my Ph.D. thesis 24.11.2011 : The first draft of my Ph.D. thesis is under construction 01.11.2011 : I am now finishing my Ph.D. within Joint Helmholtz/TUM research group 19.09.2011 : Oral presentation at MICCAI 2011 in Toronto for our paper on Multiple Organ Localization. Our work was among the runners up for a young scientist award. Here you can find the slides of my presentation: paulyMICCAI2011presentation.pdf 01.08.2011 : I am at Microsoft Research Cambridge as a Research intern - 3 months Publications 2015 L. Peter, O. Pauly, P. Chatelain, D. Mateus, N. Navab Scale-Adaptive Forest Training via an Efficient Feature Sampling Scheme Proceedings of the 18th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI), Munich, Germany, October 2015 (bib) 2014 O. Pauly, B. Diotte, P. Fallavollita, S. Weidert, E. Euler, N. Navab Machine Learning-based Augmented Reality for Improved Surgical Scene Understanding. Computerized Medical Imaging and Graphics (bib) O. Pauly, B. Diotte, S. Habert, S. Weidert, E. Euler, P. Fallavollita, N. Navab Visualization inside the operating room: 'Learning' what the surgeon wants to see The 5th International Conference on Information Processing in Computer-Assisted Interventions (IPCAI) (bib) 2013 P. Chatelain, O. Pauly, L. Peter, A. Ahmadi, A. Plate, K. Bötzel, N. Navab Learning from Multiple Experts with Random Forests: Application to the Segmentation of the Midbrain in 3D Ultrasound Proceedings of the 16th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI), Nagoya, Japan, September 2013 (bib) C. Rupprecht, O. Pauly, C. Theobalt, S. Ilic 3D Semantic Parameterization for Human Shape Modeling: Application to 3D Animation. (Oral Presentation) In Proc. International Conference on 3D Vision (3DV 2013) (bib) J. Lallemand, O. Pauly, L. Schwarz, D. J. Tan , S. Ilic Multi-task Forest for Human Pose Estimation in Depth Images. (Oral Presentation) In Proc. International Conference on 3D Vision (3DV 2013) (bib) O. Erat, O. Pauly, S. Weidert, P. Thaller, E. Euler, W. Mutschler, N. Navab, P. Fallavollita How a Surgeon becomes Superman by visualization of intelligently fused multi-modalities SPIE Medical Imaging, Orlando, Florida, USA, February 2013 (bib) 2012 O. Pauly, A. Katouzian, A. Eslami, P. Fallavollita, N. Navab Supervised Classification for Customized Intraoperative Augmented Reality Visualization The 11th IEEE and ACM International Symposium on Mixed and Augmented Reality (ISMAR), Atlanta, USA, Nov. 5 - 8, 2012. (bib) B. Glocker, O. Pauly, E. Konukoglu, A. Criminisi Joint Classification-Regression Forests for Spatially Structured Multi-Object Segmentation 12th European Conference on Computer Vision (ECCV), Firenze, Italy, October 7-13 2012. (bib) L. Peter, O. Pauly, S. Jansen, P. Smethurst, W. Ouwehand , N. Navab Automatic Event Detection within Thrombus Formation Based on Binary Integer Programming MICCAI Workshop on Medical Computer Vision, Nice, France, October 2012 (bib) A. Plate, A. Ahmadi, O. Pauly, T. Klein, N. Navab, K. Bötzel 3D Sonographic Examination of the Midbrain for Computer-Aided Diagnosis of Movement Disorders To appear: Ultrasound in Medicine and Biology, ELSEVIER, Christy K. Holland (Editor), accepted for publication July 21 2012 (bib) O. Pauly, A. Ahmadi, A. Plate, K. Bötzel, N. Navab Detection of Substantia Nigra Echogenicities in 3D Transcranial Ultrasound for Early Diagnosis of Parkinson Disease In Proc. International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI), Nice (FR), October 01-05, 2012 (bib) Y. Chen, T. Hrabe, S. Pfeffer, O. Pauly, D. Mateus, N. Navab, F. Foerster Detection and Identification of Macromolecular Complexes in Cryo-Electron Tomograms Using Support Vector Machines IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI 2012), Barcelona, Spain, May 2 - 5, 2012 (bib) 2011 O. Pauly, D. Mateus, N. Navab STARS: A New Ensemble Partitioning Approach ICCV Workshop on Information Theory in Computer Vision and Pattern Recognition (ITINCVPR 2011), Madrid, Spain, November 2011 (bib) A. Safi, M. Baust, O. Pauly, V. Castaneda, T. Lasser, D. Mateus, N. Navab, R. Hein, M. Ziai Computer-Aided Diagnosis of Pigmented Skin Dermoscopic Images MICCAI Workshop on Medical Content-based Retrieval for Clinical Decision Support, Toronto, Canada, September 2011 (bib) O. Pauly, D. Mateus, N. Navab Building Implicit Dictionaries based on Extreme Random Clustering for Modality Recognition MICCAI Workshop on Medical Content-based Retrieval for Clinical Decision Support, Toronto, Canada, September 2011 (bib) O. Pauly, B. Glocker, A. Criminisi, D. Mateus, A. Martinez-Möller, S. Nekolla, N. Navab Fast Multiple Organs Detection and Localization in Whole-Body MR Dixon Sequences To appear in Proc. Medical Image Computing and Computer-Assisted Intervention (MICCAI 2011), Toronto, Canada, September 2011 (bib) 2010 O. Pauly, D. Mateus, N. Navab ImageCLEF 2010 Working Notes on the Modality Classification Subtask. Cross Language Image Retrieval Workshop (ImageCLEF? 2010), Medical Retrieval, Padua, Italy, September 2010 (bib) O. Pauly, H. Heibel, N. Navab A Machine Learning Approach for Deformable Guide-Wire Tracking in Fluoroscopic Sequences. Medical Image Computing and Computer-Assisted Intervention (MICCAI 2010), Beijing, China, September 2010 (bib) A. Taki, O. Pauly, S.K. Setarehdan, G. Unal, N. Navab IVUS-based histology of atherosclerotic plaques: improving longitudinal resolution SPIE Medical Imaging, San Diego, California, USA, 13-18 February 2010 (bib) 2009 O. Pauly, N. Padoy, H. Poppert, I. Esposito, H-H. Eckstein, N. Navab Towards Application-specific Multi-modal Similarity Measures: a Regression Approach. MICCAI Workshop on Probabilistic Models in Medical Image Analysis (PMMIA), London, UK, September 2009. (bib) A. Taki, A. Roodaki, O. Pauly, S.K. Setarehdan, G. Unal, N. Navab A new method for characterization of coronary plaque composition via IVUS images IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI 2009), Boston, Massachusetts, USA, June 28 - July 1, 2009 (bib) O. Pauly, N. Padoy, H. Poppert, I. Esposito, N. Navab Wavelet Energy Map: A Robust Support for Multi-modal Registration of Medical Images IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR), Miami, Florida (USA), June 2009. (bib) 2008 O. Pauly, G. Unal, G. Slabaugh, S. Carlier, T. Fang Semi-Automatic Matching of OCT and IVUS Images For Image Fusion SPIE Medical Imaging, San Diego, California (USA), February 2008. (bib) Workshops 2nd MICCAI Workshop on Computer Vision for Intravascular and Intracardiac Imaging Organizers: G. Unal, I. A. Kakadiaris, N. Navab, M. Sonka Coordination Assistant: O. Pauly Program Committee: Jolanda Wentzel, Andreas Wahle, Guy Cloutier, Petia Radeva, J.H.C. Reiber, Jouke Dijkstra, Aytul Ercil Invited Speakers: Stéphane Carlier, Johannes Rieber in conjunction with MICCAI 2008, New York , USA, September 6 - 10, 2008 Teaching Winter Term 2012-2013 Hauptseminar/Master Seminar:Machine Learning Methods for Computer Vision Applications Machine Learning in Medical Applications Summer Term 2012 Hauptseminar/Master Seminar:Machine Learning Methods for Computer Vision Applications Computer Aided Medical Procedures II Summer Term 2011 Hauptseminar/Master Seminar:Machine Learning Methods for Computer Vision Applications Computer Aided Medical Procedures II Winter Term 2010-2011 Hauptseminar/Master Seminar:Machine Learning Methods for Computer Vision Applications Summer Term 2010 Hauptseminar/Master Seminar:Machine Learning Methods for Computer Vision Applications Computer Aided Medical Procedures II Summer Term 2009 Computer Aided Medical Procedures II Student Supervision MRI-Based Tissue Classification for Non-Invasive Histology of Atherosclerotic Plaques - Vladimir Golkov - Bachelor Thesis Towards Computer Aided Diagnosis of Parkinson Disease - Vladimir Golkov - IDP Identification of Macromolecular Complexes in Cryo-electron Tomograms using Support Vector Machine and Combined Correlation Functions - Yuxiang Chen - Diploma Thesis (Co-supervision with Dr. F. Förster) Random Forests for Cell Detection - Olivia Klose - IDP Random Forests for Tissue Classification in Whole-body MR - Olivia Klose - Master Thesis Human Pose Estimation Using Kinect Depth Data - Joé Lallemand - Diplomarbeit 3D Semantic Parameterization for Human Shape Modeling: Application to 3D Animation - C. Rupprecht - Bachelorarbeit Background Since 2008 Ph.D. student at the CAMPAR team Technische Universität München, with Prof. Dr. Nassir NAVAB 2004-2007 Engineering degree from the Mechanics Faculty, Technical University Munich, Germany. Double Degree Program with Supelec, Specialization in Medical Engineering 2002-2004 Engineering degree from the Supelec, Ecole Superieure d'Electricite, France. 3rd year: Double Degree Program with Technical University of Munich, Germany 2000-2002 Classes préparatoires scientifiques: two-year post-'A'-level preparatory courses for entrance exams to French engineering schools 2000 German-French Scientific Baccalaureat (Equivalent to A-levels). Passed with the highest distinction (mention Très Bien).