ResearchIssueTomoRecon

Chair for Computer Aided Medical Procedures & Augmented Reality
Lehrstuhl für Informatikanwendungen in der Medizin & Augmented Reality

Research in Tomographic Reconstruction

Table of Content

Abstract

Medical imaging is source for all kinds of computer aided medical procedures. Medical image data is used for diagnosis, planning, and intra-operative visualization. Projects in this field of research are related to improving image quality, 3D reconstruction, adapting acquisition sequences, and image pre-processing for further analysis.

Contact Person and Group Coordination

Tobias Lasser
Nassir Navab




Research Projects in Tomographic Reconstruction

Estimation of Flow Parameters from X-ray Data

Estimation of Flow Parameters from X-ray Data

This project focuses on the quantification of blood flow based on 2D and 3D angiographic X-ray image data, which is of particular interest during minimally invasive interventional procedures such as recanalizations of stenotic vessels and embolizations of arteries that feed tumors or vascular malformations in the patient's brain, for example. Our projects cover the evaluation of model-based approaches involving CFD (computational fluid dynamics) simulations as well as methods that aim at estimating the optical flow in the images and deriving quantitative blood flow information from these results.
Learning and Understanding in 3D Point Clouds

Learning and Understanding in 3D Point Clouds

Point offer are a unified representation for 3D data. Whether the sensor is a laser scanner, lidar or a depth camera, the acquired information can be stored in form an unstructured point cloud. This makes such representation ubiquitous. In this project, we aim to adapt state-of-the-art learning algorithms to efficiently handle point cloud data in order to find objects, detect structures, perform segmentation and 3d reconstruction.
patient-Specific Translational research on Atherosclerosis and Diagnosis (STAnD)

patient-Specific Translational research on Atherosclerosis and Diagnosis (STAnD)

Multispectral Reconstruction

Multispectral Reconstruction

Multispectral imaging is an emerging modality for use in dermatological diagnosis which has the potential to offer quantitative measurements of the skin tissue, thus providing a more accurate diagnosis tool for a wide range of afflictions. Multispectral images are sequences of images taken at different wavelengths and due to their improved spectral discrimination, can offer insight into the distribution of collagen, melanin, and hemoglobin within skin lesions.
The main motivation of this project is to provide dermatologists with a multispectral imaging system that allows quantification of skin lesions as well as tracking of disease progression in an automated fashion. To this end, both multispectral images are being acquired provide quantitative metrics of the skin, as well the size and geometry of the lesions.
Stereo Time-of-Flight

Stereo Time-of-Flight

This paper describes a novel method to acquire depth images based on combining a pair of ToF? (Time of Flight) cameras. As opposed to approaches that register point clouds posterior to the image acquisition, we propose to combine the measurements of the two cameras at the acquisition level. To do so, we actively control the infrared lighting of the scene such that the two cameras emit and measure the reflected infrared light first one after the other, and then simultaneously. Assuming the scene is static during these three stages and gathering the obtained depth measurements in each state, we derive a set of constraints that allow us to optimize the two depth images. In terms of hardware requirements, the cameras need to have access to the control of the infrared lights and should work with the same infrared wavelength and with exactly the same modulation frequency. A quantitative evaluation of the performance of the proposed method for different objects and setups is provided based on a simulation of the ToF? cameras. Results on real images are also provided. In both simulation and real images the stereo-ToF acquisition is able to produce more accurate depth measurements.
Scene Understanding From a Moving Camera

Scene Understanding From a Moving Camera

Modern vehicles are equipped with multiple cameras which are already used in various practical applications. Advanced driver assistance systems (ADAS) are of particular interest because of the safety and comfort features they offer to the driver. Camera based scene understanding is an important scientific problem that has to be addressed in order to provide the information needed for camera based driver assistance systems. While frontal cameras are widely used, there are applications where cameras observing lateral space can deliver better results. Fish eye cameras mounted in the side mirrors are particularly interesting, because they can observe a big area on the side of the vehicle and can be used for several applications for which the traditional front facing cameras are not suitable.

We present a general method for scene understanding using 3D reconstruction of the environment around the vehicle. It is based on pixel-wise image labeling using a conditional random field (CRF). Our method is able to create a simple 3D model of the scene and also to provide semantic labels of the different objects and areas in the image, like for example cars, sidewalks, and buildings.

We demonstrate how our method can be used for two applications that are of high importance for various driver assistance systems - car detection and free space estimation. We show that our system is able to perform in real time for speeds of up to 63 km/h.
Cardiac C-Arm CT

Cardiac C-Arm CT

Tomographic reconstruction from rotational cone-beam X-ray data is only solved for static objects of interest (like the abdominal region). In cardiac imaging, a rotational angiography sequence takes about 4 to 6s and therefore spans several heart beats. Since such an acquisition scheme forces a trade-off between consistency of the scene and reasonable baselines between camera positions, standard reconstruction techniques fail at recovering the 3D+t scene. We propose a new reconstruction framework based on variational level sets including a new data term for symbolic reconstruction as well as a novel incorporation of motion into the level set formalism. The resulting simultaneous estimation of shape and motion proves feasible in first experiments.
Deformable Semantic SLAM

Deformable Semantic SLAM

In the scope of this project we are interested in creating a dataset for deformable, semantic SLAM. The goal is to recognize, segment and reconstruct different object categories in real, indoor environments. The focus is live, dynamic objects, such as people and animals. Still, to this date, accurate segmentation in real-time of deformable surfaces is a challenging problem.
Advanced Robotics for Multi-Modal Interventional Imaging (RoBildOR)

Advanced Robotics for Multi-Modal Interventional Imaging (RoBildOR)

This project aims at developing advanced methods for robotic image acquisitions, enabling more flexible, patient- and process-specific functional and anatomical imaging with the operating theater. Using robotic manipulations, co-registered and dynamic imaging can be provided to the surgeon, allowing for optimal implementation of preoperative planning. In particular, this projects is the first one developing concepts for intraoperative SPECT-CT, and introduces intraoperative robotic Ultrasound imaging based on CT trajectory planning, enabling registration with angiographic data. With distinguished partners from Bavarian industry, this project has a fundamental contribution in developing safe, reliable, flexible, and multi-modal imaging technologies for the operating room of the future.
Reconstruction and Registration of Histology and Phase Contrast Images for Clinical Validation of Imaging Modalities

Reconstruction and Registration of Histology and Phase Contrast Images for Clinical Validation of Imaging Modalities

Before its introduction into the hospital, a new imaging modality has to be validated. In other words, appearing structures need to be correlated to the imaged tissues. Such a cross validation is only meaningful when performed against the gold standard which is histology. Currently, cross validation is performed by qualitative comparison of 3D datasets to 2D histology slices. Since the acquisition of a consistent 3D histology volume is a challenging task, its comparison to the corresponding dataset always remained qualitative.

The classic histology procedure can be divided in four steps: pre processing, cutting, post processing and imaging of the tissues. In the first step, the sample is chemically processed to preserve the tissues and is then embedded in a paraffin block. By using a microtome, it is cut in very thin slices, and put on a glass slide. During post processing the sample is stained to enhance the structures of interest. The imaging is performed with a camera mounted in a microscope, or with a dedicated scanner. Several difficulties inherent to this process can have a dramatic influence on the quality of the reconstructed histology volume. For instance, since the cutting process is done manually, problems like flipping, bending or ripping of the slides may happen. If the knife starts to wear off, some banding will appear over the slices. Moreover, a few slices could be missing. Finally since the staining color is time dependent, variation in the color of the slices can occur.

In this project, we propose to improve the histology procedure and to develop methods towards a consistent reconstruction of 3D histology volumes.
Developing Image Processing Techniques for Cryo Electron Tomography

Developing Image Processing Techniques for Cryo Electron Tomography

Cryo-ET has recently emerged as a leading technique to investigate the three-dimensional(3D) structure of biological specimens at close-to-native state. It also bridges the gap between low-resolution imaging techniques (e.g. light microscopy) and high-resolution techniques (e.g. single particle electron microscopy). The technique consists of acquiring many two-dimensional (2D) projections of the structure under scrutiny at various tilt angles under cryogenic conditions. The 3D structure is recovered through a number of steps including projection alignment, reconstruction and de-nosing. The resolution of the reconstructed tomogram, however, is a affected by the low signal to noise ratio (SNR) of the projection images (typically 0.1 to 0.01) and the limited angular coverage (typically 60  to 70 ) resulting in wedge-shaped missing information in Fourier space, the so-called missing wedge; making the reconstruction process very challenging and demanding.
SUPRA: Software Defined Ultrasound Processing for Real-Time Applications

SUPRA: Software Defined Ultrasound Processing for Real-Time Applications

SUPRA is an open-source pipeline for fully software defined ultrasound processing for real-time applications. Covering everything from beamforming to output of B-Mode images, SUPRA can help to improve the reproducibility of results and does allow for a full customization of the image acquisition workflow. Including all processing stages of a common ultrasound pipeline, it can be executed in 2D and 3D on consumer GPUs in real-time. Even on hardware as small as the CUDA enabled Jetson TX2, SUPRA allows for 2D imaging in real-time.

You can access the code on our github page: https://github.com/IFL-CAMP/supra
Additional information can be found in our work on SUPRA
Göbl, R. and Navab, N. and Hennersperger, C., SUPRA: Open Source Software Defined Ultrasound Processing for Real-Time Applications, eprint arXiv:1711.06127, Nov 2017, under review for IPCAI2018
Intra-operative Imaging and Navigation for Minimal Invasiveness in Head and Neck Cancer

Intra-operative Imaging and Navigation for Minimal Invasiveness in Head and Neck Cancer

Intra-operative Imaging and Navigation for Guidance in Neurosurgical Procedures

Intra-operative Imaging and Navigation for Guidance in Neurosurgical Procedures

Deformable Guide Wire Tracking

Deformable Guide Wire Tracking

These days, X-ray fluoroscopic imaging is the modality used most widely to guide physicians in angiographic interventions. Current guidance procedures are based on a roadmap, e.g. a digital subtracted angiography (DSA) acquired from a fixed viewpoint and the injection of contrast agent to visualize the current vessel anatomy. Such roadmaps cannot directly be blended with the fluoroscopic sequence due to misalignment caused by respiratory motion. A fundamental step toward a successful integration of any navigation application into clinical routine is the estimation and compensation of respiratory motion. We propose a novel method for deformable tracking of multiple ridge segments based on a MAP-MRF formulation and efficient discrete optimization. Ridges are modeled as B-Spline curves which allows us to apply smooth deformations based on a minimal number of parameters. Our tracking framework is well adapted to the noisy domain of fluoroscopic imaging and the handling of multiple segments.
Stereo Vision

Stereo Vision

This project focuses on the development of novel methods for efficient or accurate binocular stereo vision.
Assessment of Knee Cartilage

Assessment of Knee Cartilage

Degeneration of knee joint cartilage is an important and early indicator of osteoarthritis (OA) which is one of the major socio-economic burdens nowadays. Accurate quantification of the articular cartilage degeneration in an early stage using MR images is a promising approach in diagnosis and therapy for this disease. Particularly, volume and thickness measurement of cartilage tissue has been shown to deliver significant parameters in assessment of pathologies. Here, accurate computer-aided diagnosis tools could improve the clinical routine where image segmentation plays a crucial role. In order to overcome the time-consuming and tedious work of manual segmentation, one tries to automate the segmentation as much as possible. We focus on novel atlas-based segmentation methods for knee cartilage as well as improve today’s clinical routine of manual segmentation methods. In addition, we try to evaluate different methods for the assessment of parameters such as volume and thickness which could allow computer-aided diagnosis of knee cartilage pathologies in an early stage.
Endoscopic Video Processing

Endoscopic Video Processing

The diagnosis and surveillance of several gastrointestinal (GI) diseases such as colateral or oesaphageal cancer are performed under endoscopic guidance. However, currently there exists no computer aided navigation tool to support these procedures. The goal of this project is to provide an advanced visualisation and automatic recognition tool in order to support the navigation and targeting in GI endoscopic procedures. The aim of the project is twofold: reconstructing the organ surface from endoscopic videos using monoSLAM and automatically recognising the biopsy locations to support the navigation and targeting in endoscopy.

Related Publications

2018
C. Ulas, G. Tetteh, M.J. Thrippleton, P.A. Armitage, S.D. Makin, J.M. Wardlaw, M.E. Davies, B. Menze
Direct Estimation of Pharmacokinetic Parameters from DCE-MRI using Deep CNN with Forward Physical Model Loss
Proceedings of the 21th International Conference on Medical Image Computing and Computer Assisted Interventions (MICCAI), Granada, Spain, September 2018. (bib)
C. Ulas, G. Tetteh, S. Kaczmarz, C. Preibisch, B. Menze
DeepASL: Kinetic Model Incorporated Loss for Denoising Arterial Spin Labeled MRI via Deep Residual Learning
Proceedings of the 21th International Conference on Medical Image Computing and Computer Assisted Interventions (MICCAI), Granada, Spain, September 2018. (bib)
C. Ulas, M.J. Thrippleton, I. Marshall, M.E. Davies, P.A. Armitage, S.D. Makin, J.M. Wardlaw, B. Menze
Estimation of Pharmacokinetic Parameters in Dynamic Contrast Enhanced MRI Via Random Forest Regression
Proceedings of the International Society of Magnetic Resonance in Medicine (ISMRM), Paris, France, June 2018 (bib)
T. Cheslerean Boghiu, Y. Sharma, F. Pfeiffer, T. Lasser
Detectability Indices in Anisotropic X-ray Dark-field Tomography
International Conference on Image Formation in X-Ray Computed Tomography, Salt Lake City, USA, May 2018 (bib)
S. Seyyedi, E. Liapi, T. Lasser, R. Ivkov, R. Hatwar, J. W. Stayman
Low-Dose CT Perfusion of the Liver Using Reconstruction of Difference
IEEE Transactions on Radiation and Plasma Medical Sciences 2(3):205-214, 2018 (bib)
Y. Sharma, S. Bachche, M. Kageyama, , F. Pfeiffer, T. Lasser, A. Momose
Trochoidal X-ray Vector Radiography: Directional dark-field without grating stepping
Appl. Phys. Lett. 112, 111902 (2018); http://dx.doi.org/10.1063/1.5020361 (bib)
Y. Sharma, S. Bachche, M. Kageyama, M. Kuribayashi, F. Pfeiffer, T. Lasser, A. Momose
Trochoidal X-ray Vector Radiography (TXVR): Directional Dark-field Without Grating Stepping
International Symposium on BioMedical Applications of X-Ray Phase Contrast Imaging (IMXP), Garmisch-Patenkirchen, Germany, January 2018 (bib)
S. Seyyedi, M. Wieczorek, F. Pfeiffer, T. Lasser
Incorporating a Noise Reduction Technique into X-ray Tensor Tomography
IEEE Transactions on Computational Imaging 4(1):137-146, 2018 (bib)
2017
P. Symvoulidis, A. Lauri, A. Stefanoiu, M. Cappetta, S. Schneider, H. Jia, A. Stelzl, M. Koch, C. Cruz Perez, A. Myklatun, S. Renninger, A. Chmyrov, T. Lasser, W. Wurst, V. Ntziachristos, G. Westmeyer
NeuBtracker - imaging neurobehavioral dynamics in freely behaving fish
Nature Methods 14, 1079-1082, 2017 (bib)
D. Das, E. Coello, R. Schulte, B. Menze
Quantification of Metabolites in Magnetic Resonance Spectroscopic Imaging using Machine Learning
Accepted to Proceedings of the 20th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI), Quebec, Canada, September 2017. (bib)
M. Bieth, L. Peter, S. Nekolla, M. Eiber, G. Langs, M. Schwaiger, B. Menze
Segmentation of Skeleton and Organs in Whole-Body CT Images via Iterative Trilateration
IEEE Transactions on Medical Imaging (bib)
S. Seyyedi, E. Liapi, T. Lasser, R. Ivkov, R. Hatwar, J. W. Stayman
Evaluation of Low-Dose CT Perfusion for the Liver using Reconstruction of Difference
International Meeting on Fully Three-Dimensional Image Reconstruction in Radiology and Nuclear Medicine (Fully3D), Xi'an Shaanxi, China, June 2017 (bib)
M. Wieczorek, F. Pfeiffer, T. Lasser
Micro-structure orientation extraction for Anisotropic X-Ray Dark-Field Tomography
International Meeting on Fully Three-Dimensional Image Reconstruction in Radiology and Nuclear Medicine (Fully3D), Xi'an Shaanxi, China, June 2017 (bib)
Y. Sharma, F. Schaff, M. Wieczorek, F. Pfeiffer, T. Lasser
Acquisition Schemes for Directional Dark-Field Tomographic Modalities
International Meeting on Fully Three-Dimensional Image Reconstruction in Radiology and Nuclear Medicine (Fully3D), Xi'an Shaanxi, China, June 2017 (bib)
N. Schilling, M. Wieczorek, T. Lasser
Statistical Models for Anisotropic X-Ray Dark-field Tomography
International Meeting on Fully Three-Dimensional Image Reconstruction in Radiology and Nuclear Medicine (Fully3D), Xi'an Shaanxi, China, June 2017 (bib)
M. Bieth, M. Krönke, R. Tauber, M. Dahlbender, M. Retz, S. Nekolla, B. Menze, T. Maurer, M. Eiber, M. Schwaiger
Exploring New Multimodal Quantitative Imaging Indices for the Assessment of Osseous Tumour Burden in Prostate Cancer using 68Ga-PSMA-PET/CT
Journal of Nuclear Medicine (bib)
Y. Sharma, F. Schaff, M. Wieczorek, F. Pfeiffer, T. Lasser
Design of Acquisition Schemes and Setup Geometry for Anisotropic X-ray Dark-Field Tomography (AXDT)
Scientific Reports 7:3195, 2017. (bib)
C. Ulas, PA. Gómez, JI. Sperl, C. Preibisch, MI. Menzel, A. Haase, B. Menze
A Robust Reconstruction Method for Quantitative Perfusion MRI: Application to Brain Dynamic Susceptibility Contrast (DSC) Imaging
Proceedings of the International Society of Magnetic Resonance in Medicine (ISMRM), Hawaii, USA, April 2017 (bib)
C. Ulas, S. Kaczmarz, C. Preibisch, JI. Sperl, MI. Menzel, A. Haase, B. Menze
A Spatio-temporal Denoising Approach based on Total Variation Regularization for Arterial Spin Labeling
Proceedings of the International Society of Magnetic Resonance in Medicine (ISMRM), Hawaii, USA, April 2017 (bib)
M. Molina-Romero, PA. Gómez, JI. Sperl, AJ. Stewart, DK. Jones, MI. Menzel, B. Menze
Theory, validation and application of blind source separation to diffusion MRI for tissue characterisation and partial volume correction
Proceedings of the International Society of Magnetic Resonance in Medicine (ISMRM), Hawaii, USA, April 2017 (bib)
X. Liu, PA. Gómez, T. Sprenger, AB. Solana, F. Wiesinger, MI. Menzel, JI. Sperl, B. Menze
Fast, Volumetric and Silent Multi-contrast Zero Echo Time Imaging
Proceedings of the International Society of Magnetic Resonance in Medicine (ISMRM), Hawaii, USA, April 2017 (bib)
PA. Gómez, G. Buonincontri, M. Molina-Romero, JI. Sperl, MI. Menzel, B. Menze
Accelerated parameter mapping with compressed sensing: an alternative to MR fingerprinting
Proceedings of the International Society of Magnetic Resonance in Medicine (ISMRM), Hawaii, USA, April 2017 (bib)
G. Buonincontri, L. Biagi, PA. Gómez, R. Schulte, M. Tosetti
Spiral keyhole imaging for MR fingerprinting
Proceedings of the International Society of Magnetic Resonance in Medicine (ISMRM), Hawaii, USA, April 2017 (bib)
2016
D. Das, E. Coello, R. Schulte, B. Menze
Spectral Denoising for MR Spectroscopic Imaging using Non-Local Means
Proceedings of the ISMRM Workshop on MR Spectroscopy, Lake Constance, Germany, August 2016 (bib)
E. Kubala, KA. Muñoz-Álvarez, G. Topping, C. Hundshammer, B. Feuerecker, PA. Gómez, G. Pariani, F. Schilling, SJ. Glaser, MI. Menzel, M. Schwaiger
Hyperpolarized 13C Metabolic Magnetic Resonance Spectroscopy and Imaging
Journal of Visualized Experiments (bib)
C. Ulas, PA. Gómez, F. Krahmer, JI. Sperl, MI. Menzel, B. Menze
Robust Reconstruction of Accelerated Perfusion MRI Using Local and Nonlocal Constraints
Proceedings of MICCAI Workshop on Reconstruction and Analysis of Moving Body Organs, Athens, Greece, October 2016 (bib)
J. Gardiazabal, P. Matthies, J. Vogel, B. Frisch, N. Navab, S. I. Ziegler, T. Lasser
Flexible Mini Gamma Camera Reconstructions of Extended Sources using Step and Shoot and List Mode
Medical Physics 43(12):6418-6428, 2016. (bib)
D. Das, E. Coello, R. Schulte, B. Menze
Spatially Adaptive Spectral Denoising for MR Spectroscopic Imaging using Frequency-Phase Non-Local Means
Proceedings of the 19th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI), Athens, Greece, October 2016 (bib)
PA. Gómez, M. Molina-Romero, C. Ulas, G. Buonincontri, JI. Sperl, DK. Jones, MI. Menzel, B. Menze
Simultaneous Parameter Mapping, Modality Synthesis, and Anatomical Labeling of the Brain with MR Fingerprinting
Proceedings of the 19th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI), Athens, Greece, October 2016 (bib)
P. Christ, M.E.A. Elshaer, F. Ettlinger, S. Tatavarty, M. Bickel, P. Bilic, M. Rempfler, M. Armbruster, M. Hofmann, M. D'Anastasi, W.H. Sommer, A. Ahmadi, B. Menze
Automatic Liver and Lesion Segmentation in CT Using Cascaded Fully Convolutional Neural Networks and 3D Conditional Random Fields
Proceedings of the 19th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI), Athens, Greece, October 2016 (bib)
M. Wieczorek, F. Schaff, F. Pfeiffer, T. Lasser
Anisotropic X-Ray Dark-Field Tomography: A Continuous Model and its Discretization
Phys. Rev. Lett. 117, 158101, 2016 (bib)
M. Molina-Romero, PA. Gómez, JI. Sperl, DK. Jones, MI. Menzel, B. Menze
Tissue microstructure characterisation through relaxometry and diffusion MRI using sparse component analysis
ISMRM Workshop on Breaking the Barriers of Diffusion MRI, Lisbon, Portugal, September 2016 (bib)
Y. Sharma, M. Wieczorek, F. Schaff, S. Seyyedi, F. Prade, F. Pfeiffer, T. Lasser
Six dimensional X-ray Tensor Tomography with a compact laboratory setup
Appl. Phys. Lett. 109, 134102 (2016); http://dx.doi.org/10.1063/1.4963649 (bib)
S. Seyyedi, M. Wieczorek, C. Jud, F. Pfeiffer, T. Lasser
A Regularized X-ray Tensor Tomography Reconstruction Technique
International Conference on Image Formation in X-Ray Computed Tomography, Bamberg, Germany, July 2016 (bib)
M. Esposito, B. Busam, C. Hennersperger, J. Rackerseder, N. Navab, B. Frisch
Multimodal US-Gamma Imaging using Collaborative Robotics for Cancer Staging Biopsies
International Journal of Computer Assisted Radiology and Surgery (bib)
M. Wieczorek, C. Jud, F. Schaff, F. Pfeiffer, T. Lasser
X-ray tensor tomography -- linear system approach to reconstruction
International Conference on Image Formation in X-Ray Computed Tomography, Bamberg, Germany, July 2016 (bib)
Y. Sharma, M. Wieczorek, C. Jud, F. Schaff, F. Pfeiffer, T. Lasser
X-ray Tensor Tomography: How much to measure?
International Conference on Image Formation in X-Ray Computed Tomography, Bamberg, Germany, July 2016 (bib)
PA. Gómez, G. Buonincontri, M. Molina-Romero, C. Ulas, JI. Sperl, MI. Menzel, B. Menze
3D Magnetic Resonance Fingerprinting with a Clustered Spatiotemporal Dictionary
Proceedings of the International Society of Magnetic Resonance in Medicine (ISMRM), Singapore, May 2016 (bib)
C. Ulas, PA. Gómez, JI. Sperl, C. Preibisch, B. Menze
Spatio-temporal MRI Reconstruction by Enforcing Local and Global Regularity via Dynamic Total Variation and Nuclear Norm Minimization
Proceedings of International Symposium on Biomedical Imaging (ISBI), April 2016 (bib)
S. Seyyedi, M. Wieczorek, Y. Sharma, F. Schaff, C. Jud, F. Pfeiffer, T. Lasser
Component-based TV Regularization for X-ray Tensor Tomography
International Symposium on Biomedical Imaging (ISBI), Prague, Czech Republic, April 2016 (bib)
M. Wieczorek, F. Schaff, C. Jud, F. Pfeiffer, T. Lasser
An optimization oriented approach to X-ray tensor tomogprahy
International Symposium on BioMedical Applications of X-Ray Phase Contrast Imaging (IMXP), Garmisch-Patenkirchen, Germany, January 2016 (bib)
Y. Sharma, M. Wieczorek, F. Schaff, C. Jud, F. Pfeiffer, T. Lasser
Acquisition Geometry for X-ray Tensor Tomography
International Symposium on BioMedical Applications of X-Ray Phase Contrast Imaging (IMXP), Garmisch-Patenkirchen, Germany, January 2016 (bib)
C. Bluemel, P. Matthies, K. Herrmann, S. P. Povoski
3D Scintigraphic Imaging and Navigation in Radioguided Surgery: Freehand SPECT Technology and its Clinical Applications
Expert Review of Medical Devices, 2016 (bib)
2015
B. Fuerst, J. Sprung, F. Pinto, B. Frisch, T. Wendler, H. Simon, L. Mengus, N. S. van der Berg, H.G. van der Poel, F.W.B. van Leeuwen, N. Navab
First Robotic SPECT for Minimally Invasive Sentinel Lymph Node Mapping
IEEE Transactions on Medical Imaging, 2015. (bib)
C. Schulte zu Berge, D. Declara, C. Hennersperger, M. Baust, N. Navab
Real-time Uncertainty Visualization for B-Mode Ultrasound
Proceedings Scientific Visualization 2015, Chicago IL, U.S.A, October 2015 (bib)
PA. Gómez, C. Ulas, JI. Sperl, T. Sprenger, M. Molina-Romero, MI. Menzel, B. Menze
Learning a Spatiotemporal Dictionary for Magnetic Resonance Fingerprinting with Compressed Sensing
1st International Workshop on Patch-based Techniques in Medical Imaging, MICCAI 2015, Munich, Germany, October 2015 (bib)
V. Golkov, A. Dosovitskiy, P. Saemann, JI. Sperl, T. Sprenger, M. Czisch, MI. Menzel, PA. Gómez, A. Haase, T. Brox, D. Cremers
q-Space Deep Learning for Twelve-Fold Shorter and Model-Free Diffusion MRI Scans
Proceedings of the 18th International Conference on Medical Image Computing and Computer Assisted Interventions (MICCAI), Munich, Germany, October 2015 (bib)
F. Pinto, B. Fuerst, B. Frisch, N. Navab
Radiopositive Tissue Displacement Compensation for SPECT-guided Surgery
Proceedings of the 18th International Conference on Medical Image Computing and Computer Assisted Interventions (MICCAI), Munich, Germany, October 2015 (bib)
B. Fuerst, J. Fotouhi, N. Navab
Vision-based Intraoperative Cone-Beam CT Stitching for Non-overlapping Volumes
Proceedings of the 18th International Conference on Medical Image Computing and Computer Assisted Interventions (MICCAI), Munich, Germany, October 2015 (bib)
M. Esposito, B. Busam, C. Hennersperger, J. Rackerseder, A. Lu, N. Navab, B. Frisch
Cooperative Robotic Gamma Imaging: Enhancing US-guided Needle Biopsy
Proceedings of the 18th International Conference on Medical Image Computing and Computer Assisted Interventions (MICCAI), Munich, Germany, October 2015 (bib)
X. Liu, F. Wiesinger, AB. Solana, T. Sprenger, M. Molina-Romero, PA. Gómez, JI. Sperl, B. Menze, MI. Menzel
A Simulation Framework to Investigate T1 Contamination on Diffusion Prepared RUFIS
Proceedings of the European Society for Magnetic Resonance in Medicine and Biology 32, Edinburgh, Scotland, UK October 2015 (bib)
M. Bieth, R. Donner, G. Langs, M. Schwaiger, B. Menze
Anatomical triangulation: from sparse landmarks to dense annotation of the skeleton in CT images
Proceedings of the 26th British Machine Vision Conference - BMVC, Swansea 2015 (bib)
V. de Luca, T. Benz, S. Kondo, L. König, D. Lübke, S. Rothlübbers, O. Somphone, S. Allaire, M.A. Lediju Bell, D.Y.F. Chung, A. Cifor, C. Grozea, M. Günther, J. Jenne, T. Kipshagen, M. Kowarschik, N. Navab, J. Rühaak, J. Schwaab, C. Tanner
The 2014 liver ultrasound tracking benchmark
Physics in Medicine and Biology, volume 60, issue 14, page 5571, July 2015. (bib)
A. Ahmadi, F. Milletari, N. Navab, M. Schuberth, A. Plate, K. Bötzel
3D Transcranial Ultrasound as a Novel Intra-operative Imaging Technique for DBS surgery - A Feasibility Study
In Proc. 6th International Conference on Information Processing in Computer-Assisted Interventions (IPCAI), Barcelona (SP), June 24, 2015 (bib)
J. Vogel, F. Schaff, A. Fehringer, C. Jud, M. Wieczorek, F. Pfeiffer, T. Lasser
Constrained X-ray tensor tomography reconstruction
Optics Express 23(12):15134-15151, 2015 (bib)
M. Wieczorek, J. Vogel, A. Weinmann, C. Jud, F. Schaff, M. Storath, F. Pfeiffer, M. Baust, T. Lasser
Total Variation Regularization for X-Ray Tensor Tomography
Proceedings of Fully3D, Newport, USA, June 2015 (bib)
J. Vogel, M. Wieczorek, C. Jud, F. Schaff, F. Pfeiffer, T. Lasser
X-ray Tensor Tomography Reconstruction
Proceedings of Fully3D, Newport, USA, June 2015 (bib)
J. Gardiazabal, J. Vogel, P. Matthies, M. Wieczorek, B. Frisch, N. Navab, S. I. Ziegler, T. Lasser
Fully 3D thyroid imaging with mini gamma cameras
Proceedings of Fully3D, Newport, USA, June 2015 (bib)
M. Molina-Romero, JI. Sperl, T. Sprenger, PA. Gómez, X. Liu, ET. Tan, C. Hardy, L. Marinelli, B. Menze, DK. Jones, MI. Menzel
Comparison of different compressed sensing denoising strategies for DSI acquisition for several diffusion mixing times
Proceedings of the International Society of Magnetic Resonance in Medicine (ISMRM), Toronto, Ontario, Canada June 2015 (bib)
PA. Gómez, T. Sprenger, MI. Menzel, JI. Sperl
Fitting the Diffusional Kurtosis Tensor to Rotated Diffusion MR Images
Proceedings of the International Society of Magnetic Resonance in Medicine (ISMRM), Toronto, Ontario, Canada June 2015 (bib)
PA. Gómez, T. Sprenger, AA. Lopez, JI. Sperl, B. Fernandez, M. Molina-Romero, X. Liu, V. Golkov, M. Czisch, P. Saemann, MI. Menzel, B. Menze
Using Diffusion and Structural MRI for the Automated Segmentation of Multiple Sclerosis Lesions
Proceedings of the International Society of Magnetic Resonance in Medicine (ISMRM), Toronto, Ontario, Canada June 2015 (bib)
M. Salehi, A. Ahmadi, R. Prevost, N. Navab, W. Wein
Patient-specific 3D Ultrasound Simulation Based on Convolutional Ray-tracing and Appearance Optimization
MICCAI 2015, the 18th International Conference on Medical Image Computing and Computer Assisted Interventions (bib)
M. Wieczorek, J. Frikel, J. Vogel, E. Eggl, F. Kopp, P. B. Noël, F. Pfeiffer, L. Demaret, T. Lasser
X-ray Computed Tomography using Curvelet Sparse Regularization
Medical Physics 42(4):1555, 2015 (bib)
T. Lasser, J. Gardiazabal, M. Wieczorek, P. Matthies, J. Vogel, B. Frisch, N. Navab
Towards 3D thyroid imaging using robotic mini gamma cameras
Bildverarbeitung für die Medizin, Lübeck, Germany, March 2015 (bib)
PA. Gómez, JI. Sperl, T. Sprenger, C. Metzler-Baddeley, DK. Jones, P. Saemann, M. Czisch, MI. Menzel, B. Menze
Joint Reconstruction of Multi-contrast MR Images for Multiple Sclerosis Lesion Segmentation
Workshop Bildverarbeitung für die Medizin, Lübeck, Germany, March 2015 (bib)
K. Ralovich, L. Itu, D. Vitanovski, P. Sharma, Razvan Ioan Ionasec, V. Mihalef, W. Krawtschuk, Yefeng Zheng, A. Everett, G. Pongiglione, B. Leonardi, R. Ringel, N. Navab, T. Heimann, D. Comaniciu
Non-invasive Hemodynamic Assessment, Treatment Outcome Prediction and Follow-up of Aortic Coarctation from MR Imaging
Medical Physics Journal (bib)
C. Vetter, T. Lasser, A. Okur, N. Navab
1D-3D Registration for Intra-operative Nuclear Imaging in Radio-guided Surgery
IEEE Transactions on Medical Imaging 34(2):608-617, 2015 (bib)
A. Hartl, D. I. Shakir, T. Lasser, S. I. Ziegler, N. Navab
Detection models for freehand SPECT reconstruction
Physics in Medicine and Biology 60(3):1031-1046, 2015 (bib)
2014
PA. Gómez, JI. Sperl, MA. Janich, O. Khegai, F. Wiesinger, SJ. Glaser, A. Haase, M. Schwaiger, R. Schulte, MI. Menzel
Multi-site kinetic modeling of 13C metabolic MR images using [1-13C]pyruvate
Radiology Research and Practice, Volume 2014, Article ID 871619 (bib)
C. Schulte zu Berge, M. Baust, A. Kapoor, N. Navab
Predicate-based Focus-and-Context Visualization for 3D Ultrasound
IEEE Transactions on Visualization and Computer Graphics (Proceedings Scientific Visualization 2014), Paris, France, November 2014 (bib)
B. Fuerst, T. Mansi, F. Carnis, M. Saelzle, T. Zhang, J. Declerck, T. Boettger, J. Bayouth, N. Navab, A. Kamen
Patient-Specific Biomechanical Model for the Prediction of Lung Motion from 4D CT Images
IEEE Transactions on Medical Imaging, 2014. (bib)
O. Zettinig, C. Hennersperger, C. Schulte zu Berge, M. Baust, N. Navab
3D Velocity Field and Flow Profile Reconstruction from Arbitrarily Sampled Doppler Ultrasound Data
Proceedings of the 17th International Conference on Medical Image Computing and Computer Assisted Interventions (MICCAI), Boston, USA, September 2014.
The original publication is available online at link.springer.com
(bib)
C. Schulte zu Berge, Artur Grunau, Hossain Mahmud, N. Navab
CAMPVis - A Game Engine-inspired Research Framework for Medical Imaging and Visualization
Technical Report 2014, Chair for Computer Aided Medical Procedures, Technische Universität München, Munich, Germany (bib)
M. Müller, L.E.S. Helljesen, R. Prevost, I. Viola, K. Nylund, O.H. Gilja, N. Navab, W. Wein
Deriving Anatomical Context from 4D Ultrasound
Eurographics Workshop on Visual Computing for Biology and Medicine (VCBM), September 3-5 2014, Vienna, Austria (bib)
K. Ralovich, M. John, E. Camus, N. Navab, T. Heimann
6DoF Catheter Detection, Application to Intracardiac Echocardiography
Medical Image Computing and Computer-Assisted Intervention - MICCAI 2014 (bib)
C. Schulte zu Berge, A. Kapoor, N. Navab
Orientation-Driven Ultrasound Compounding Using Uncertainty Information
Proceedings of the 5th International Conference on Information Processing in Computer-Assisted Interventions (IPCAI), Fukuoka, Japan, June 2014 (bib)
B. Fuerst, W. Wein, M. Müller, N. Navab
Automatic Ultrasound-MRI Registration for Neurosurgery using the 2D and 3D LC2 Metric
Medical Image Analysis, 2014(18), pp. 1312-1319. (bib)
T. Benz, M. Kowarschik, J. Endres, T. Redel, S. Demirci, N. Navab
A Fourier-Based Approach to the Angiographic Assessment of Flow Diverter Efficacy in the Treatment of Cerebral Aneurysms
IEEE Transactions on Medical Imaging, volume 33, issue 9, pages 1788-1802, September 2014. (bib)
O. Zettinig, T. Mansi, D. Neumann, B. Georgescu, S. Rapaka, P. Seegerer, E. Kayvanpour, F. Sedaghat-Hamedani, A. Amr, J. Haas, H. Steen, H. Katus, B. Meder, N. Navab, A. Kamen, D. Comaniciu
Data-Driven Estimation of Cardiac Electrical Diffusivity from 12-Lead ECG Signals
Medical Image Analysis, vol. 18, iss. 8, pp. 1361-1376, 2014. The original publication is available online at medicalimageanalysisjournal.com (bib)
P. Matthies, J. Gardiazabal, A. Okur, J. Vogel, T. Lasser, N. Navab
Mini Gamma Cameras for Intra-operative Nuclear Tomographic Reconstruction
Medical Image Analysis 18(8):1329-1336, 2014 (bib)
2013
P. Novosad, M. Bieth, H. Lombaert, K. Siddiqi, A.J. Reader
Applying a [11 C] raclopride template to automated binding potential estimation in HRRT brain PET
Nuclear Science Symposium and Medical Imaging Conference - NSS/MIC, 2013 (bib)
M. Bieth, H. Lombaert, A.J. Reader, K. Siddiqi
Atlas construction for dynamic (4D) PET using diffeomorphic transformations
Proceedings of the 16th Conference on Medical Image Computing and Computer Assisted Interventions - MICCAI, 2013 (bib)
T. Mansi, R. Beinart, O. Zettinig, S. Rapaka, B. Georgescu, A. Kamen, Y. Dori, M.M. Zviman, D.A. Herzka, H.R. Halperin, D. Comaniciu
A Framework for the Pre-clinical Validation of LBM-EP for the Planning and Guidance of Ventricular Tachycardia Ablation
Proceedings of MICCAI Workshop on Statistical Atlases and Computational Models of the Heart (STACOM), Nagoya, Japan, September 2013.
The original publication is available online at link.springer.com
(bib)
O. Zettinig, T. Mansi, B. Georgescu, E. Kayvanpour, F. Sedaghat-Hamedani, A. Amr, J. Haas, H. Steen, B. Meder, H. Katus, N. Navab, A. Kamen, D. Comaniciu
Fast Data-Driven Calibration of a Cardiac Electrophysiology Model from Images and ECG
Proceedings of the 16th International Conference on Medical Image Computing and Computer Assisted Interventions (MICCAI), Nagoya, Japan, September 2013.
The original publication is available online at link.springer.com
(bib)
B. Georgescu, S. Rapaka, T. Mansi, O. Zettinig, A. Kamen, D. Comaniciu
Towards Real-Time Cardiac Electrophysiology Computations Using GP-GPU Lattice-Boltzmann Method
Proceedings of MICCAI Workshop on High Performance Computing for Biomedical Image Analysis (HPC-MICCAI), Nagoya, Japan, September 2013 (bib)
W. Wein, A. Ladikos, B. Fuerst, A. Shah, K. Sharma, N. Navab
Global Registration of Ultrasound to MRI using the LC2 Metric for Enabling Neurosurgical Guidance
Proceedings of the 16th International Conference on Medical Image Computing and Computer Assisted Interventions (MICCAI), Nagoya, Japan, September 2013 (bib)
P. Matthies, K. Sharma, A. Okur, J. Gardiazabal, J. Vogel, T. Lasser, N. Navab
First use of mini gamma cameras for intra-operative robotic SPECT reconstruction
Proceedings of the 16th International Conference on Medical Image Computing and Computer Assisted Interventions (MICCAI), Nagoya, Japan, September 2013 (bib)
, , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , ,
Standardized evaluation framework for evaluating coronary artery stenosis detection, stenosis quantification and lumen segmentation algorithms in computed tomography angiography
Medical Image Analysis, 17, 8, 856 - 876, 2013 (bib)
P. Matthies, A. Okur, T. Wendler, N. Navab, M. Friebe
Combination of intra-operative freehand SPECT imaging with MR images for guidance and navigation
IEEE Engineering in Medicine and Biology (EMBC), Osaka, Japan, July 2013. (bib)
O. Zettinig, T. Mansi, B. Georgescu, S. Rapaka, A. Kamen, J. Haas, K.S. Frese, F. Sedaghat-Hamedani, E. Kayvanpour, A. Amr, S. Hardt, D. Mereles, H. Steen, A. Keller, H. Katus, B. Meder, N. Navab, D. Comaniciu
From Medical Images to Fast Computational Models of Heart Electromechanics: An Integrated Framework towards Clinical Use
Proceedings of the 7th International Conference on Functional Imaging and Modeling of the Heart (FIMH), London, UK, June 2013.
The original publication is available online at link.springer.com
(bib)
W. Wein, A. Ladikos
Towards General Motion Recovery in Cone-Beam Computed Tomography
12th International Meeting on Fully Three-Dimensional Image Reconstruction in Radiology and Nuclear Medicine, June 16-21 2013, Lake Tahoe, CA USA (bib)
M. Wieczorek, J. Frikel, J. Vogel, F. Pfeiffer, L. Demaret, T. Lasser
Curvelet sparse regularization for differential phase-contrast X-ray imaging
Proceedings of Fully3D, Lake Tahoe, USA, June 2013. (bib)
C. Bluemel, A. Schnelzer, A. Okur, A. Ehlerding, S. Paepke, K. Scheidhauer, M. Kiechle
Freehand SPECT for image-guided sentinel lymph node biopsy in breast cancer
European Journal of Nuclear Medicine and Molecular Imaging.
The original publication is available online at www.springerlink.com
(bib)
M. Yigitsoy, N. Navab
Structure Propagation for Image Registration
IEEE Trans. Med. Imag., vol. 32, no. 9, pp. 1657-1670, September 2013 (bib)
J. Vogel, T. Lasser, J. Gardiazabal, N. Navab
Trajectory optimization for intra-operative nuclear tomographic imaging
Medical Image Analysis 17(7):723-731, 2013. (bib)
T. Reichl, J. Gardiazabal, N. Navab
Electromagnetic servoing - a new tracking paradigm
IEEE Transactions on Medical Imaging, vol. 32, no. 8, pp. 1526-1535, April 2013. Available online. (bib)
L. Itu, P. Sharma, K. Ralovich, V. Mihalef, Razvan Ioan Ionasec, A. Everett, R. Ringel, , D. Comaniciu
Non-Invasive Hemodynamic Assessment of Aortic Coarctation: Validation with In Vivo Measurements
Annals of Biomedical Engineering (bib)
T. Reichl
Advanced Hybrid Tracking and Navigation for Computer-Assisted Interventions
Dissertation. Official publication available at mediatum.ub.tum.de. (bib)
A. Eslami, A. Karamalis, A. Katouzian, N. Navab
Segmentation By Retrieval With Guided Random Walks: Application To Left Ventricle Segmentation in MRI
Medical Image Analysis, vol. 17, no. 2, 2013, www.sciencedirect.com.ezproxy.cul.columbia.edu/science/article/pii/S136184151200151X (bib)
2012
A. Schnelzer, A. Ehlerding, C. Bluemel, A. Okur, K. Scheidhauer, S. Paepke, M. Kiechle
Showcase of Intraoperative 3D Imaging of the Sentinel Lymph Node in a Breast Cancer Patient using the New Freehand SPECT Technology
Breast Care 2012;7:484-486 (bib)
H. Heibel, B. Glocker, M. Groher, M. Pfister, N. Navab
Interventional Tool Tracking using Discrete Optimization
IEEE Transactions on Medical Imaging (TMI) (bib)
K. Ralovich, L. Itu, V. Mihalef, P. Sharma, Razvan Ioan Ionasec, D. Vitanovski, W. Krawtschuk, A. Everett, R. Ringel, N. Navab, D. Comaniciu
Hemodynamic Assessment of Pre- and Post-Operative Aortic Coarctation from MR Images
Proceedings of the 15th International Conference on Medical Image Computing and Computer Assisted Interventions (MICCAI), Nice, France, October 2012 (bib)
O. K. Oye, W. Wein, D. M. Ulvang, K. Matre, I. Viola
Real Time Image-Based Tracking of 4D Ultrasound Data
Medical Image Computing and Computer-Assisted Intervention (MICCAI 2012), Nice, France, October 2012 (bib)
B. Fuerst, T. Mansi, P. Khurd, T. Zhang, J. Declerck, T. Boettger, N. Navab, J. Bayouth, A. Kamen, D. Comaniciu
A Personalized Biomechanical Model for Respiratory Motion Prediction
Proceedings of the 15th International Conference on Medical Image Computing and Computer Assisted Interventions (MICCAI), Nice, France, October 2012 (bib)
M. Bieth, P. Gravel, K. Siddiqi, A.J. Reader
Towards fully automated MR-independent binding potential estimation for PET
Nuclear Science Symposium and Medical Imaging Conference - NSS/MIC, 2012 (bib)
J. Beitzel, A. Ahmadi, A. Karamalis, W. Wein, N. Navab
Ultrasound Bone Detection Using Patient-Specific CT Prior
International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC), San Diego, USA, September 1 2012. (bib)
V. Solteszova, L.E.S. Helljesen, W. Wein, O.H. Gilja, I. Viola
Lowest-Variance Streamlines for Filtering of 3D Ultrasound
Eurographics Workshop on Visual Computing for Biology and Medicine (VCBM) 2012, Norrköping, Sweden, September 2012 (bib)
K. Ralovich, L. Itu, V. Mihalef, P. Sharma, Razvan Ioan Ionasec, D. Vitanovski, A. Everett, W. Krawtschuk, M. Suehling, N. Navab, D. Comaniciu
Non-invasive Assessment of Aortic Coarctation through Blood Flow Computation and MRI
VPH2012 Integrative approaches to computational biomedicine - The Virtual Physiological Human Initiative Scientific Sessions 2012 (bib)
A. Katouzian, A. Karamalis, D. Sheet, E. Konofagou, B. Baseri, S. Carlier, A. Eslami, A. Konig, N. Navab, A. Laine
Iterative Self-Organizing Atherosclerotic Tissue Labeling in Intravascular Ultrasound Images and Comparison with Virtual Histology
IEEE Transactions on Biomedical Engineering (bib)
A. Karamalis, W. Wein, T. Klein, N. Navab
Ultrasound Confidence Maps using Random Walks
Medical Image Analysis, 16, 6, 1101 - 1112, 2012, DOI: http://dx.doi.org/10.1016/j.media.2012.07.005 (bib)
P. Lo, B. v. Ginneken, J. M. Reinhardt, T. Yavarna, P. A. d. Jong, B. Irving, C. Fetita, M. Ortner, R. Pinho, J. Sijbers, M. Feuerstein, A. Fabijanska, C. Bauer, R. Beichel, C. S. Mendoza, R. Wiemker, J. Lee, A. P. Reeves, S. Born, weinheimer, E. M. v. Rikxoort, J. Tschirren, K. Mori, B. Odry, D. P. Naidich, I. Hartmann, E. A. Hoffman, M. Prokop, J. H. Pedersen, M. d. Bruijne
Extraction of Airways from CT (EXACT'09)
IEEE Transactions on Medical Imaging, July 2012 (bib)
A. Plate, A. Ahmadi, O. Pauly, T. Klein, N. Navab, K. Bötzel
3D Sonographic Examination of the Midbrain for Computer-Aided Diagnosis of Movement Disorders
To appear: Ultrasound in Medicine and Biology, ELSEVIER, Christy K. Holland (Editor), accepted for publication July 21 2012 (bib)
S. Abdurahman, A. Jerebko, T. Mertelmeier, T. Lasser, N. Navab
Out-of-plane artifact reduction in tomosynthesis based on regression modeling and outlier detection
11th Intl. Workshop on Breast Imaging (IWDM 2012), Philadelphia, USA, July 2012 (bib)
C. Wachinger, N. Navab
A Contextual Maximum Likelihood Framework for Modeling Image Registration
IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR), Providence, Rhode Island (USA), June 2012. (bib)
Y. Yagi, M. Groher, M. Feuerstein, M. Onozato, H. Heibel, N. Navab
Overcoming Challenges in Histology 3D Imaging
11th European Congress on Telepathology and 5th International Congress on Virtual Microscopy, Venice, Italy, June 2011. (bib)
F. Schilling, S. Düwel, M. Durst, U. Köllisch, C. Metzler-Baddeley, PA. Gómez, M. Schwaiger, R. Schulte, SJ. Glaser, A. Haase, A. Otto, MI. Menzel
Compartmentation of MCF-7 tumour cell metabolites characterised by hyperpolarised 13C diffusion-weighted spectroscopy
Proceedings of the International Society of Magnetic Resonance in Medicine (ISMRM), Melbourne, Australia, May 2012 (bib)
K. Ralovich, V. Mihalef, P. Sharma, L. Itu, D. Vitanovski, Razvan Ioan Ionasec, M. Suehling, A. Everett, G. Pongiglione, N. Navab, D. Comaniciu
Modeling and Simulation Framework for Hemodynamic Assessment of Aortic Coarctation Patients
ISMRM '12: Proceedings of the 20th Scientific Meeting and Exhibition of International Society for Magnetic Resonance in Medicine (bib)
PA. Gómez, JI. Sperl, O. Khegai, S. Grott, E. Weidl, MA. Janich, F. Wiesinger, SJ. Glaser, A. Haase, M. Schwaiger, R. Schulte, MI. Menzel
Multi-side kinetic modeling of 13C metabolic MR using [1-13C]pyruvate
Proceedings of the International Society of Magnetic Resonance in Medicine (ISMRM), Melbourne, Australia, May 2012 (bib)
A. Karamalis, A. Katouzian, S. Carlier, N. Navab
Confidence Estimation in IVUS Radio-Frequency Data with Random Walks
In Proc. 9th IEEE International Symposium on Biomedical Imaging (ISBI), Barcelona, Spain, 2012 (bib)
A. Eslami, A. Teimori, M. Yigitsoy, N. Navab
A new framework for morphological and morphometric study of fish species based on groupwise registration of otolith images
IEEE International Symposium on Biomedical Imaging (ISBI), Barcelona, spain, May 2012 (bib)
M. Sofka, K. Ralovich, J. Zhang, K. Zhou, D. Comaniciu
Progressive Data Transmission for Anatomical Landmark Detection in a Cloud
Methods of Information in Medicine, 2012, Invited Paper. In Press (bib)
A. Hartl, D. I. Shakir, R. Kojchev, N. Navab, S. I. Ziegler, T. Lasser
Freehand SPECT reconstructions using look up tables
SPIE Medical Imaging Conference, February 4 - February 9 2012, San Diego, USA (bib)
P. Waelkens, A. Ahmadi, N. Navab
'Frangi goes US': Multiscale Tubular Structure Detection Adapted to 3D Ultrasound
In Proc. International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI), Nice (FR), October 01-05, 2012 (bib)
O. Pauly, A. Ahmadi, A. Plate, K. Bötzel, N. Navab
Detection of Substantia Nigra Echogenicities in 3D Transcranial Ultrasound for Early Diagnosis of Parkinson Disease
In Proc. International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI), Nice (FR), October 01-05, 2012 (bib)
C. Wachinger, N. Navab
Entropy and Laplacian Images: Structural Representations for Multi-Modal Registration
Medical Image Analysis, Volume 16, Issue 1, January 2012, Pages 1–17. (bib)
M. Feuerstein, B. Glocker, T. Kitasaka, Y. Nakamura, S. Iwano, K. Mori
Mediastinal Atlas Creation from 3-D Chest Computed Tomography Images: Application to Automated Detection and Station Mapping of Lymph Nodes
Medical Image Analysis, vol. 16, no. 1, pp. 63-74, January 2012.
The original publication is available online at www.elsevier.com
(bib)
L. Wang, P. Fallavollita, R. Zou, X. Chen, S. Weidert, N. Navab
Closed-form inverse kinematics for interventional C-arm X-ray imaging with six degrees of freedom: modeling and application
IEEE Transactions on Medical Imaging (bib)
C. Wachinger, N. Navab
Simultaneous Registration of Multiple Images: Similarity Metrics and Efficient Optimization
IEEE Transactions on Pattern Analysis and Maschine Intelligence (TPAMI) (bib)
C. Wachinger, T. Klein, N. Navab
The 2D Analytic Signal for Envelope Detection and Feature Extraction on Ultrasound Images
Medical Image Analysis, in press (bib)
C. Wachinger, T. Klein, N. Navab
Locally adaptive Nakagami-based ultrasound similarity measures
Ultrasonics, Volume 52, Issue 4, April 2012, Pages 547–554. (bib)
C. Wachinger, M. Yigitsoy, E. Rijkhorst, N. Navab
Manifold Learning for Image-Based Breathing Gating in Ultrasound and MRI
Medical Image Analysis, Volume 16, Issue 4, May 2012, Pages 806–818. (bib)
S. Atasoy, D. Mateus, A. Meining, G. Z. Yang, N. Navab
Endoscopic Video Manifolds for Targeted Optical Biopsy
IEEE Transactions on Medical Imaging. (bib)
2011
C. Vetter, T. Lasser, T. Wendler, N. Navab
1D-3D Registration for Functional Nuclear Imaging
Medical Image Computing and Computer Assisted Intervention (MICCAI), Toronto, Canada, September 20-24 2011. (bib)
S. Atasoy, D. Mateus, A. Meining, G. Z. Yang, N. Navab
Targeted Optical Biopsies for Surveillance Endoscopies
Medical Image Computing and Computer Assisted Intervention (MICCAI), Toronto, Canada, September 20-24 2011. (bib)
M. Yigitsoy, C. Wachinger, N. Navab
Temporal Groupwise Registration for Motion Modeling
Information Processing in Medical Imaging (IPMI), July 3-8 2011. (bib)
S. Nekolla, M. Souvatzoglou, S. Schachoff, F. Graner, S. Fürst, A. Martinez-Möller, S. I. Ziegler, M. Schwaiger
Cardiac Attenuation Correction for an Integrated MR/PET System: Initial Comparison to PET/CT
Radiological Society of North America (RSNA 2011) Chicago, IL, USA, November 2011 (bib)
PA. Gómez, JI. Sperl, O. Khegai, MA. Janich, F. Wiesinger, SJ. Glaser, M. Schwaiger, R. Schulte, A. Haase, MI. Menzel
Multi-side kinetic model to assess [1-13C]pyruvate in-vivo metabolism
Proceedings of the European Society for Magnetic Resonance in Medicine and Biology (ESMRMB), Leipzig, Germany, October 2011 (bib)
A. Hartl, T. Lasser, N. Navab, S. I. Ziegler
Impact of acquisition geometry and physical model on Freehand SPECT reconstructions
IEEE Medical Imaging Conference, October 23 - October 29 2011, Valencia, Spain (bib)
S. Diepenbrock, C. Schulte zu Berge, K. Hinrichs, L. Wachsmuth, C. Faber
DTI Visualization Using the Voreen Framework
ESMRMB 2011 Congress, October 2011, Leipzig, Germany (bib)
M. Feuerstein, H. Heibel, J. Gardiazabal, N. Navab, M. Groher
Reconstruction of 3-D Histology Images by Simultaneous Deformable Registration
Proceedings of Medical Image Computing and Computer-Assisted Intervention (MICCAI 2011), Toronto, Canada, September 2011.
The original publication is available online at www.springerlink.com
(bib)
W. Wein, A. Ladikos
Detecting Patient Motion in Projection Space for Cone-beam Computed Tomography
Medical Image Computing and Computer-Assisted Intervention (MICCAI 2011), Toronto, Canada, September 2011 (bib)
K. Ralovich, Razvan Ioan Ionasec, V. Mihalef, P. Sharma, B. Georgescu, A. Everett, N. Navab, D. Comaniciu
Computational Fluid Dynamics Framework for Large-Scale Simulation in Pediatric Cardiology
Computational Biomechanics for Medicine VI (CBM6) MICCAI Workshop (bib)
W. Wein, A. Ladikos, A. Baumgartner
Self-calibration of geometric and radiometric parameters for cone-beam computed tomography
11th International Meeting on Fully Three-Dimensional Image Reconstruction in Radiology and Nuclear Medicine, July 11-15 2011, Potsdam, Germany. (bib)
X. Luo, M. Feuerstein, T. Kitasaka, K. Mori
Robust Bronchoscope Motion Tracking Using Sequential Monte Carlo Methods in Navigated Bronchoscopy: Dynamic Phantom and Patient Validation
International Journal of Computer Assisted Radiology and Surgery. (bib)
C. Wachinger, T. Klein, N. Navab
The 2D Analytic Signal on RF and B-mode Ultrasound Images
Information Processing in Medical Imaging (IPMI), July 3-8 2011. (bib)
K. Mori, T. Kugo, X. Luo, P. Dressel, T. Reichl, M. Feuerstein, N. Navab, T. Kitasaka
Endobronchial ultrasound endoscope navigation system based on CT-US calibration
Computer Assisted Radiology and Surgery, Berlin, Germany, June 2011 (bib)
D. Deguchi, M. Feuerstein, T. Kitasaka, Y. Suenaga, I. Ide, H. Murase, K. Imaizumi, Y. Hasegawa, K. Mori
Real-time marker-free patient registration for electromagnetic navigated bronchoscopy : a phantom study
International Journal of Computer Assisted Radiology and Surgery.
The original publication is available online at www.springerlink.com
(bib)
M. Sofka, K. Ralovich, N. Birkbeck, J. Zhang, K. Zhou
Integrated Detection Network (IDN) For Pose And Boundary Estimation In Medical Images
IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI 2011), Chicago, Illinois, USA, March 30 - April 2, 2011 (bib)
L. König, J. M. Raya Garcia del Olmo
Edge Aberration in MRI. Correction of Dislocations in Sub-Voxel Edge Detection—a Proof of Concept
Proc. of Bildverarbeitung für die Medizin (BVM 2011), Lübeck, Germany, March 2011.
The original publication is available online at www.springerlink.com.
(bib)
X. Luo, M. Feuerstein, T. Kitasaka, K. Mori
On scale invariant features and sequential Monte Carlo sampling for bronchoscope tracking
SPIE Medical Imaging, Orlando, Florida, USA, February 2011 (bib)
X. Luo, M. Feuerstein, T. Kitasaka, K. Mori
A novel bronchoscope tracking method for bronchoscopic navigation using a low cost optical mouse sensor
SPIE Medical Imaging, Orlando, Florida, USA, February 2011 (bib)
A. Maier, J.-H. Choi, A. Keil, C. Niebler, M. Sarmiento, A. Fieselmann, G. Gold, S. Delp, R. Fahrig
Analysis of Vertical and Horizontal Circular C-Arm Trajectories
SPIE Medical Imaging, San Diego, CA, U.S.A., Feburary 2011 (bib)
2010
C. Wachinger, M. Yigitsoy, N. Navab
Manifold Learning for Image-Based Breathing Gating with Application to 4D Ultrasound
Medical Image Computing and Computer Assisted Intervention (MICCAI), Beijing, China, September 20-24 2010. (bib)
S. Atasoy, D. Mateus, J. Lallemand, A. Meining, G. Z. Yang, N. Navab
Endoscopic Video Manifolds
Medical Image Computing and Computer Assisted Intervention (MICCAI), Beijing, China, September 20-24 2010. (bib)
A. Horng, J. M. Raya Garcia del Olmo, M. Zscharn, L. König, M. Notohamiprodjo, M. Pietschmann, U. Hoehne-Hückstädt, I. Hermanns, U. Glitsch, R. Ellegast, K. G. Hering, M. Reiser, Ch. Glaser
Locoregional Deformation Pattern of the Patellar Cartilage After Different Loading Types—High-Resolution 3D-MRI Volumetry at 3 T in-vivo
Fortschr Röntgenstr. 2010; 182:1–9 (bib)
T. Wendler, T. Lasser, S. I. Ziegler, K. Scheidhauer
Freehand SPECT/US: new approach for intraoperative hybrid imaging of sentinel nodes
Proceedings of the International Sentinel Node Society Meeting, Yokohama, Japan, 2010 (bib)
T. Wendler, D. Zaeuner, S. Wiesner, K. Scheidhauer
Fused SPECT/CT and real-time video visualization for intraoperative guidance in SLNB of head and neck malignancies
Proceedings of the International Sentinel Node Society Meeting, Yokohama, Japan, 2010 (bib)
K. Scheidhauer, A. Ehlerding, J. Saeckl, A. Rieger, K. Herrmann, A. Schnelzer, M. E. Martignoni, T. Wendler
Feasibility evaluation of freehand SPECT for intraoperative 3D lymphatic mapping
Proceedings of the International Sentinel Node Society Meeting, Yokohama, Japan, 2010 (bib)
I. Santi, L. Fantini, K. Herrmann, Ch. Fuccio, T. Wendler, P. Caroli, P. Castelucci, S. Nicolini, A. K. Buck, M. Schwaiger, S. Fanti
Freehand SPECT 3D-imaging for sentinel lymph node mapping in breast cancer: preliminary preoperative study for future intraoperative use in the operating room
Proceedings of the International Sentinel Node Society Meeting, Yokohama, Japan, 2010 (bib)
M. C. Kreissl, T. Wendler, K. Herrmann, K. Scheidhauer
Freehand SPECT: First experiences with a new method of 3D-SLN mapping in melanoma
Proceedings of the International Sentinel Node Society Meeting, Yokohama, Japan, 2010 (bib)
X. Luo, M. Feuerstein, D. Deguchi, T. Kitasaka, T. Hirotsugu, K. Mori
Development and Comparison of New Hybrid Motion Tracking for Bronchoscopic Navigation
Medical Image Analysis. Special issue on Computer Assisted Interventions. Accepted for publication, 17 November 2010. (bib)
X. Luo, T. Reichl, M. Feuerstein, T. Kitasaka, K. Mori
Modified Hybrid Bronchoscope Tracking Based on Sequential Monte Carlo Sampler: Dynamic Phantom Validation
Asian Conference on Computer Vision, Queenstown, New Zealand, November 2010 (bib)
I. Santi, L. Fantini, K. Herrmann, Ch. Fuccio, T. Wendler, P. Caroli, P. Castelucci, A. K. Buck, M. Schwaiger, S. Fanti
Freehand SPECT for sentinel lymph node biopsy: first clinical experience
Proceedings of EANM 2010, Vienna, Austria, October 2010 (bib)
A. K. Buck, A. Ehlerding, J. Saeckl, K. Herrmann, T. Wendler, M. E. Martignoni, A. Schnelzer, M. Schwaiger
Evaluation of feasibility of freehand SPECT in the operating room
Proceedings of EANM 2010, Vienna, Austria, October 2010 (bib)
A. Schnelzer, A. Ehlerding, T. Chen, T. Wendler, K. Scheidhauer, S. Paepke, M. Kiechle
Sentinel lymph node detection with intraoperative freehand SPECT in breast cancer patients
Proceedings of the Annual Meeting of the German Society of Gynecology and Obstetrics (DGGG) 2010, Munich, Germany, October 2010 (bib)
M. Sofka, K. Ralovich, J. Zhang, K. Zhou, D. Comaniciu
Progressive Data Transmission for Hierarchical Detection in a Cloud
Proceedings of the 2nd International Workshop on High-Performance Medical Image Computing for Image-Assisted Clinical Intervention and Decision-Making (HP-MICCAI 2010), Bejing, China, 22 Sep 2010. (bib)
O. Pauly, D. Mateus, N. Navab
ImageCLEF 2010 Working Notes on the Modality Classification Subtask.
Cross Language Image Retrieval Workshop (ImageCLEF? 2010), Medical Retrieval, Padua, Italy, September 2010 (bib)
T. Kitasaka, H. Yano, M. Feuerstein, K. Mori
Bronchial region extraction from 3D chest CT image by voxel classification based on local intensity structure
Third International Workshop on Pulmonary Image Analysis, September 2010 (bib)
X. Luo, M. Feuerstein, T. Reichl, T. Kitasaka, K. Mori
An Application Driven Comparison of Several Feature Extraction Algorithms in Bronchoscope Tracking During Navigated Bronchoscopy
5th International Workshop on Medical Imaging and Augmented Reality, Sep 2010, Beijing (bib)
G.Gul-Isguder, G. Unal, M. Groher, N. Navab, A.K.Kalkan, M. Degertekin, H.Hetterich, J.Rieber
Manifold Learning for Image-Based Gating of Intravascular Ultrasound(IVUS) Pullback Sequences
5th International Workshop on Medical Imaging and Augmented Reality, Sep 2010, Beijing (bib)
M. Feuerstein, T. Sugiura, D. Deguchi, T. Reichl, T. Kitasaka, K. Mori
Marker-free Registration for Electromagnetic Navigation Bronchoscopy under Respiratory Motion
5th International Workshop on Medical Imaging and Augmented Reality, Sep 2010, Beijing (bib)
P. Dressel, M. Feuerstein, T. Reichl, T. Kitasaka, N. Navab, K. Mori
Direct Co-Calibration of Endobronchial Ultrasound and Video
5th International Workshop on Medical Imaging and Augmented Reality, Sep 2010, Beijing (bib)
A. Safi, V. Castaneda, T. Lasser, N. Navab
Skin Lesions Classification with Optical Spectroscopy
5th International Workshop on Medical Imaging and Augmented Reality, Sep 2010, Beijing (bib)
C. Wachinger, N. Navab
Manifold Learning for Multi-Modal Image Registration
21st British Machine Vision Conference (BMVC), Aberystwyth, United Kingdom, August 31 - September 3 2010. (bib)
C. Wachinger, N. Navab
Structural Image Representation for Image Registration
IEEE Computer Society Conference on Computer Vision and Pattern Recognition, San Francisco, California, June 2010. Workshop on Mathematical Methods in Biomedical Image Analysis (MMBIA). (bib)
T. Wendler, K. Herrmann, A. Schnelzer, M. E. Martignoni, T. Lasser, J. Traub, A. Ehlerding, J. Saeckl, N. Navab, M. Kiechle, H. Friess, M. Schwaiger, S. I. Ziegler, A. K. Buck
Visione 3-D SPECT intraoperatoria: una nuova metodica per chirurgia radioguiata
Proceedings of SICO 2010, Milan, Italy, June 2010 (bib)
T. Wendler, K. Herrmann, A. Schnelzer, T. Lasser, J. Traub, O. Kutter, A. Ehlerding, K. Scheidhauer, T. Schuster, M. Kiechle, M. Schwaiger, N. Navab, S. I. Ziegler, A. K. Buck
First Demonstration of 3D Lymphatic Mapping using freehand SPECT
Proceedings of the International Conference on Sentinel Node Biopsy and Radioguided Head & Neck Surgery (SNB), Copenhagen, Denmark, May 2010 (bib)
J. Saeckl, A. Ehlerding, K. Herrmann, T. Wendler, M. Schwaiger, M. Kiechle, H. Friess, A. K. Buck, A. Schnelzer, M. E. Martignoni
Evaluation of feasibility of freehand SPECT in the operating room
Proceedings of the International Conference on Sentinel Node Biopsy and Radioguided Head & Neck Surgery (SNB), Copenhagen, Denmark, May 2010 (bib)
A. Taki, H.Hetterich, A. Roodaki, S.K. Setarehdan, G. Unal, J.Rieber, N. Navab, A. Konig
A new approach for improving coronary plaque component analysis based on intravascular ultrasound images
Journal of Ultrasound in Medicine and Biology., vol. 36, no. 8, pp. 1245-1258, August 2010 (bib)
J. M. Raya Garcia del Olmo, A. Horng, L. König, M. Reiser, Ch. Glaser
Detecting Statistically Significant Changes in Cartilage Thickness with Sub-Voxel Precision
Proceedings of the 18th congress of the International Society for Magnetic Resonance in Medicine (ISMRM 2010), Stockholm, Sweden. Presentation 3192, electronic poster session “Meniscus & Cartilage” (bib)
A. K. Buck, A. Schnelzer, T. Wendler, K. Herrmann, T. Lasser, J. Traub, O. Kutter, T. Schuster, A. Ehlerding, K. Scheidhauer, M. Kiechle, N. Navab, S. I. Ziegler, M. Schwaiger
First demonstration of 3D lymphatic mapping in breast cancer using freehand SPECT
Proceedings of DGN Nuklearmedizin 2010, Leipzig, Germany, April 2010 (bib)
K. Herrmann, A. Schnelzer, T. Wendler, M. Hoyer, D. Weisgerber, T. Lasser, S. Paepke, M. E. Martignoni, M. Kiechle, N. Navab, S. I. Ziegler, M. Schwaiger
Evaluation of feasibility of freehand SPECT in the operating room
Proceedings of DGN Nuklearmedizin 2010, Leipzig, Germany, April 2010 (bib)
C. Wachinger, D. Mateus, A. Keil, N. Navab
Manifold Learning for Patient Position Detection in MRI
IEEE International Symposium on Biomedical Imaging (ISBI), Rotterdam, The Netherlands, April 14 - 17 2010. (bib)
H. Heibel, B. Glocker, N. Paragios, N. Navab
Needle Tracking Through Higher-Order MRF Optimization
IEEE International Symposium on Biomedical Imaging (ISBI), Rotterdam, The Netherlands, April 14 - 17 2010. (bib)
A. Calleja, Razvan Ioan Ionasec, M. A. Vannan
AUTOMATED QUANTITATIVE MODELING OF THE AORTIC VALVE AND ROOT IN AORTIC REGURGITATION USING VOLUME 3-D TRANSESOPHAGEAL ECHOCARDIOGRAPHY
ACC, 2010, Atlanta, USA, March 2010 (bib)
X. Luo, M. Feuerstein, T. Sugiura, T. Kitasaka, K. Mori, K. Imaizumi, Y. Hasegawa
Towards hybrid bronchoscope tracking under respiratory motion: evaluation on a dynamic motion phantom
SPIE Medical Imaging, San Diego, California, USA, February 2010 (bib)
M. Feuerstein, T. Kitasaka, K. Mori
Adaptive Model Based Pulmonary Artery Segmentation in 3D Chest CT
SPIE Medical Imaging, San Diego, California, USA, February 2010 (bib)
A. Taki, O. Pauly, S.K. Setarehdan, G. Unal, N. Navab
IVUS-based histology of atherosclerotic plaques: improving longitudinal resolution
SPIE Medical Imaging, San Diego, California, USA, 13-18 February 2010 (bib)
Ingmar Voigt, D. Vitanovski, Razvan Ioan Ionasec, A. Tsymbal, B. Georgescu, K. Zhou, D. Huber, N. Navab, J. Hornegger, D. Comaniciu
Learning discriminative distance functions for valve retrieval and improved decision support in valvular heart disease
SPIE Medical Imaging, 2010, San Diego, USA, February 2010 (bib)
Sasa Grbic, Razvan Ioan Ionasec, Yefeng Zheng, D. Zaeuner, B. Georgescu, D. Comaniciu
Aortic Valve and Ascending Aortic Root Modeling from 3D and 3D+t CT
SPIE Medical Imaging, 2010, San Diego, USA, February 2010 (bib)
T. Sugiura, M. Feuerstein, T. Kitasaka, Y. Suenaga, K. Imaizumi, Y. Hasegawa, K. Mori
A study on a breathing motion compensation for bronchoscope tracking based on bronchial tree structure information
IEICE Medical Imaging, Naha, Japan, January 2010 (bib)
C. Rohkohl, G. Lauritsch, A. Keil, J. Hornegger
CAVAREV--an open platform for evaluating 3D and 4D cardiac vasculature reconstruction
Physics in Medicine and Biology, vol. 55, no. 10, pp. 2905-2915, 2010 (bib)
D. Vitanovski, Razvan Ioan Ionasec, A. Tsymbal, B. Georgescu, D. Huber, J. Hornegger, D. Comaniciu
Cross-modality Assessment and Planning for Pulmonary Trunk Treatment using CT and MRI imaging
Medical Image Computing and Computer Assisted Intervention (MICCAI), Beijing, China, September 20-24 2010. (bib)
Sasa Grbic, Razvan Ioan Ionasec, D. Vitanovski, Ingmar Voigt, B. Georgescu, , N. Navab, D. Comaniciu
Complete Valvular Heart Apparatus Model from 4D Cardiac CT
Medical Image Computing and Computer Assisted Intervention (MICCAI), Beijing, China, September 20-24 2010. (bib)
M. Blume, A. Martinez-Möller, A. Keil, N. Navab, M. Rafecas
Joint Reconstruction of Image and Motion in Gated Positron Emission Tomography
IEEE Trans. Med. Imag., vol. 29, no. 11, pp. 1892-1906, November 2010 (bib)
M. Blume, A. Keil, N. Navab, M. Rafecas
Joint Reconstruction of Image and Motion for PET: Displacement Fields Versus a B-Spline Motion Model
Proc. IEEE Nuclear Science Symposium and Medical Imaging Conference, Knoxville, TN, U.S.A., October 2010 (bib)
M. Blume, M. Rafecas
Joint Reconstruction of Image and Motion for PET Using Linear Diffusion Regularization
Congreso Anual de la Sociedad Espa\~nola de Ingenier\'ia Biom\'edica, Madrid, Spain, November 2010 (bib)
2009
A. Sotiras, N. Komodakis, B. Glocker, J.-F. Deux, N. Paragios
Graphical Models and Deformable Diffeomorphic Population Registration Using Global and Local Metrics
Medical Image Computing and Computer Assisted Intervention (MICCAI), London, UK, September 20-24 2009. (bib)
S. Atasoy, B. Glocker, S. Giannarou, D. Mateus, A. Meining, G. Z. Yang, N. Navab
Probabilistic Region Matching in Narrow-Band Endoscopy for Targeted Optical Biopsy
Medical Image Computing and Computer Assisted Intervention (MICCAI), London, UK, September 20-24 2009. (bib)
J. Traub, K. Herrmann, T. Lasser, N. Navab, S. I. Ziegler, A. K. Buck, T. Wendler
Freehand SPECT/Ultrasound Fusion for Hybrid Image-guided Resection
Proceedings of RSNA 2009, Chicago, USA, December 2009 (bib)
H. Yano, M. Feuerstein, T. Kitasaka, K. Mori
Study on bronchus region extraction from 3D chest CT images using local intensity structure analysis
18th Meeting of the Japan Society of Computer Assisted Surgery, Tokyo, Japan, November 2009 (bib)
T. Kugo, M. Feuerstein, T. Kitasaka, K. Mori
A study on construction of respiratory lung motion model for bronchoscope guidance system
18th Meeting of the Japan Society of Computer Assisted Surgery, Tokyo, Japan, November 2009 (bib)
T. Sugiura, M. Feuerstein, T. Kitasaka, K. Imaizumi, Y. Hasegawa, K. Mori
A study on a method for bronchoscope tracking considering breathing motion by using bronchial structure
18th Meeting of the Japan Society of Computer Assisted Surgery, Tokyo, Japan, November 2009 (bib)
X. Luo, M. Feuerstein, T. Kitasaka, M. Mori, H. Takabatake, H. Natori, K. Imaizumi, Y. Hasegawa, K. Mori
Improvement of Bronchoscope Tracking by Combining SURF Features Based Camera Motion Estimation and Image Registration
18th Meeting of the Japan Society of Computer Assisted Surgery, Tokyo, Japan, November 2009 (bib)
A. Taki, M. Maadani, S.K. Setarehdan, A. Roodaki, H.R. Sanaati, N. Navab
Detection of atherosclerotic plaque composition using intravascular images
Iranian Heart Journal, Fall 2009 (bib)
W. Wein, E. Camus, M. John, M. Diallo, C. Duong, A. Al-Ahmad, R. Fahrig, A. Khamene, C. Xu
Towards Guidance of Electrophysiological Procedures with Real-time 3D Intracardiac Echocardiography Fusion to C-arm CT
Medical Image Computing and Computer-Assisted Intervention (MICCAI 2009), London, UK, September 2009 (bib)
C. Wachinger, N. Navab
Alignment of Viewing-Angle Dependent Ultrasound Images.
Medical Image Computing and Computer-Assisted Intervention (MICCAI), London, UK, September 20-24 2009 (bib)
O. Pauly, N. Padoy, H. Poppert, I. Esposito, H-H. Eckstein, N. Navab
Towards Application-specific Multi-modal Similarity Measures: a Regression Approach.
MICCAI Workshop on Probabilistic Models in Medical Image Analysis (PMMIA), London, UK, September 2009. (bib)
O. Kutter, W. Wein, N. Navab
Multi-modal registration based Ultrasound Mosaicing
Medical Image Computing and Computer-Assisted Intervention (MICCAI), London, UK, September 20-24 2009 (bib)
A. Keil, J. Vogel, G. Lauritsch, N. Navab
Dynamic Cone Beam Reconstruction Using a New Level Set Formulation
Medical Image Computing and Computer Assisted Intervention (MICCAI), London, UK, September 20-24, 2009. (bib)
M. Feuerstein, T. Kitasaka, K. Mori
Automated Anatomical Likelihood Driven Extraction and Branching Detection of Aortic Arch in 3-D Chest CT
Second International Workshop on Pulmonary Image Analysis, September 2009 (bib)
M. Feuerstein, T. Kitasaka, K. Mori
Adaptive Branch Tracing and Image Sharpening for Airway Tree Extraction in 3-D Chest CT
Second International Workshop on Pulmonary Image Analysis, September 2009 (bib)
N. Komodakis, A. Besbes, B. Glocker, N. Paragios
Biomedical Image Analysis Using Markov Random Fields & Efficient Linear Programing
Internatinal Conference of the IEEE Engineering in Medicine and Biology Society (EMBC), Minneapolis, USA, September 2-6 2009. (Invited paper) (bib)
Benedikt Schultis
Video-based Bronchoscope Tracking for Navigated Bronchoscopy
Bachelor's Thesis. Technische Universität München, September 2009 (bib)
A. Keil, J. Vogel, G. Lauritsch, N. Navab
Dynamic Cone-Beam Reconstruction Using a Variational Level Set Formulation
Proc. Int'l Meeting on Fully Three-Dimensional Image Reconstruction in Radiology and Nuclear Medicine (Fully3D), Beijing, P.R. China, September 5-10, 2009. (bib)
C. Bichlmeier, S.M. Heining, M. Feuerstein, N. Navab
The Virtual Mirror: A New Interaction Paradigm for Augmented Reality Environments
IEEE Trans. Med. Imag., vol. 28, no. 9, pp. 1498-1510, September 2009 (bib)
H. Yano, D. Deguchi, M. Feuerstein, K. Mori, T. Kitasaka, Y. Suenaga
Study on bronchus region extraction from 3D chest CT images based on analysis of local intensity value distribution
28th Meeting of the Japanese Society of Medical Imaging Technology, Nagoya, Japan, August 2009 (bib)
X. Luo, M. Feuerstein, D. Deguchi, T. Kitasaka, Y. Suenaga, K. Imaizumi, Y. Hasegawa, K. Mori
SIFT Feature-based Motion Estimation for Bronchoscope Tracking
28th Meeting of the Japanese Society of Medical Imaging Technology, Nagoya, Japan, August 2009 (bib)
T. Kugo, M. Feuerstein, K. Mori, T. Kitasaka, Y. Suenaga, Y. Hasegawa, K. Imaizumi, S. Iwano
A preliminary study on making respiratory motion model for bronchoscope guidance system
28th Meeting of the Japanese Society of Medical Imaging Technology, Nagoya, Japan, August 2009 (bib)
D. Deguchi, K. Mori, M. Feuerstein, T. Kitasaka, C. R. Maurer, Jr., Y. Suenaga, H. Takabatake, M. Mori, H. Natori
Selective image similarity measure for bronchoscope tracking based on image registration
Medical Image Analysis, vol. 13, no. 4, pp. 621-633, August 2009 (bib)
H. Yano, M. Feuerstein, T. Kitasaka, K. Mori
Study on bronchus region extraction from 3D chest CT images using local intensity structure analysis and CT value distribution features
Medical Imaging Workshop of the Institute of Electronics, Information and Communication Engineers, Tokyo, Japan, July 2009 (bib)
A. Taki, A. Roodaki, O. Pauly, S.K. Setarehdan, G. Unal, N. Navab
A new method for characterization of coronary plaque composition via IVUS images
IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI 2009), Boston, Massachusetts, USA, June 28 - July 1, 2009 (bib)
C. Wachinger, N. Navab
Similarity Metrics and Efficient Optimization for Simultaneous Registration
IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR), Miami, Florida (USA), June 2009. (bib)
O. Pauly, N. Padoy, H. Poppert, I. Esposito, N. Navab
Wavelet Energy Map: A Robust Support for Multi-modal Registration of Medical Images
IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR), Miami, Florida (USA), June 2009. (bib)
H. Heibel, B. Glocker, M. Groher, N. Paragios, N. Komodakis, N. Navab
Discrete Tracking of Parametrized Curves
IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR), Miami, Florida (USA), June 2009. (bib)
Razvan Ioan Ionasec, Benno Heigl, J. Hornegger
Acquisition-related motion compensation for digital subtraction angiography
Computerized Medical Imaging and Graphics, Volume 33, Issue 4, Pages 247-332 (June 2009) (bib)
M. Feuerstein, T. Reichl, J. Vogel, J. Traub, N. Navab
Magneto-Optical Tracking of Flexible Laparoscopic Ultrasound: Model-Based Online Detection and Correction of Magnetic Tracking Errors
IEEE Trans. Med. Imag., vol. 28, no. 6, pp. 951-967, June 2009 (bib)
N. Navab, S.M. Heining, J. Traub
Camera Augmented Mobile C-arm (CAMC): Calibration, Accuracy Study and Clinical Applications
IEEE Transactions Medical Imaging, 29 (7), 1412-1423 (bib)
T. Wendler, X. Feng, T. Lasser, K. Herrmann, J. Traub, K. Scheidhauer, S. I. Ziegler, D. Lenhart, J. Grahneis, M. Schwaiger, N. Navab, A. K. Buck
Freehand SPECT for 3D thyroid scintigraphy: first patient report
Proceedings of DGN Nuklearmedizin 2009, Leipzig, Germany, April 2009 (bib)
K. Herrmann, T. Wendler, T. Chen, A. Bartel, T. Lasser, K. Scheidhauer, J. Traub, T. Schuster, S. I. Ziegler, M. Schwaiger, A. K. Buck, N. Navab
Freehand SPECT: first in-vivo use for lymphatic mapping and comparison to conventional imaging
Proceedings of DGN Nuklearmedizin 2009, Leipzig, Germany, April 2009 (bib)
T. Reichl, J. Passenger, O. Acosta, O. Salvado
Echtzeit-Ultraschallsimulation auf Grafik-Prozessoren mit CUDA
Proceedings of Bildverarbeitung fuer die Medizin (BVM 2009), Heidelberg, Germany, March 2009 (bib)
T. Reichl, J. Passenger, O. Acosta, O. Salvado
Ultrasound goes GPU: real-time simulation using CUDA
SPIE Medical Imaging, Orlando, Florida, USA, February 2009 (bib)
O. Kutter, A. Karamalis, W. Wein, N. Navab
A GPU-Based Framework for Simulation of Medical Ultrasound
SPIE Medical Imaging, Orlando, Florida, USA, February 2009 (bib)
M. Feuerstein, D. Deguchi, T. Kitasaka, S. Iwano, K. Imaizumi, Y. Hasegawa, Y. Suenaga, K. Mori
Automatic Mediastinal Lymph Node Detection in Chest CT
SPIE Medical Imaging, Orlando, Florida, USA, February 2009 (bib)
C. Wachinger, S. Baumann, J. Zeltner, B. Glocker, N. Navab
Sphere Extraction in MR Images with Application to Whole-Body MRI.
SPIE Medical Imaging, Orlando, Florida, USA, 7-12 February 2009 (bib)
Z. Jiang, K. Mori, Y. Nimura, M. Feuerstein, T. Kitasaka, Y. Suenaga, Y. Hayashi, E. Ito, M. Fujii, T. Nagatani, Y. Kajita, T. Wakabayashi, J. Yoshida
An Improved Method for Compensating Ultra-tiny Electromagnetic Tracker Utilizing Position and Orientation Information and Its Application to a Flexible Neuroendoscopic Surgery Navigation System
SPIE Medical Imaging, Orlando, Florida, USA, February 2009 (bib)
T. Sugiura, D. Deguchi, M. Feuerstein, T. Kitasaka, Y. Suenaga, K. Mori
A method for accelerating bronchoscope tracking based on image registration by using GPU
SPIE Medical Imaging, Orlando, Florida, USA, February 2009 (bib)
A. Karamalis, W. Wein, O. Kutter, N. Navab
Fast Hybrid Freehand Ultrasound Volume Reconstruction
In Proc. SPIE Medical Imaging, Orlando, Florida, USA, February 2009 (bib)
Ingmar Voigt, Razvan Ioan Ionasec, B. Georgescu, Helene Houle, D. Huber, J. Hornegger, D. Comaniciu
Model-driven physiological assessment of the mitral valve from 4D TEE
SPIE Medical Imaging, 2009, Orlando, USA, February 2009 (bib)
Razvan Ioan Ionasec, A. Tsymbal, D. Vitanovski, B. Georgescu, K. Zhou, N. Navab, D. Comaniciu
Shape-based diagnosis of the aortic VALVE
SPIE Medical Imaging, 2009, Orlando, USA, February 2009 (bib)
O. Kutter, R. Shams, N. Navab
Visualization and GPU-accelerated simulation of medical ultrasound from CT images
Computer Methods and Programs in Biomedicine, Volume 94, Issue 3, June, 2009 (bib)
D. Vitanovski, Razvan Ioan Ionasec, B. Georgescu, D. Huber, R. Taylor, J. Hornegger, D. Comaniciu
Personalized pulmonary trunk modeling for intervention planning and valve assessment estimated from CT data
Medical Image Computing and Computer Assisted Intervention (MICCAI), London, UK, September 20-24 2009. (bib)
Razvan Ioan Ionasec, Ingmar Voigt, B. Georgescu, Helene Houle, J. Hornegger, N. Navab, D. Comaniciu
Modeling and assessment of the Aortic-Mitral valve coupling from 4D TEE and CT
Medical Image Computing and Computer Assisted Intervention (MICCAI), London, UK, September 20-24 2009. (bib)
M. Blume, A. Keil, N. Navab, M. Rafecas
Blind Motion Compensation for Positron-Emission-Tomography
SPIE Medical Imaging, Orlando, FL, U.S.A., Feburary 2009 (bib)
M. Blume, A. Martinez-Möller, A. Keil, N. Navab, M. Rafecas
Simultaneous Reconstruction of Image and Motion in Gated Positron-Emission-Tomography
Proc. IEEE Nuclear Science Symposium and Medical Imaging Conference, Orlando, FL, U.S.A., October 2009 (bib)
M. Blume, A. Martinez-Möller, A. Keil, N. Navab, M. Rafecas
Joint Reconstruction of Image and Motion in Gated Positron-Emission-Tomography
10th International Meeting on Fully Three-Dimensional Image Reconstruction in Radiology and Nuclear Medicine, Beijing, China, September 2009 (bib)
T. Felder, M. Blume, J. Oliver, M. Rafecas
ML-EM Implementation on a GPU: Avoiding Simultaneous Read-Modify-Write Processes
10th International Meeting on Fully Three-Dimensional Image Reconstruction in Radiology and Nuclear Medicine, Beijing, China, September 2009 (bib)
2008
C. Wachinger, B. Glocker, J. Zeltner, N. Paragios, N. Komodakis, M. S. Hansen, N. Navab
Deformable Mosaicing for Whole-body MRI
Medical Image Computing and Computer-Assisted Intervention (MICCAI), New York, USA, September 6-10 2008 (bib)
D. Zikic, B. Glocker, M. S. Hansen, A. Khamene, N. Navab
Construction of Statistical Shape Models from Minimal Deformations
Workshop "Manifolds in Medical Imaging: Metrics, Learning and Beyond" in conjunction with Medical Image Computing and Computer-Assisted Intervention (MICCAI 2008), New York City, NY, USA, September 2008 (bib)
D. Zikic, M. S. Hansen, B. Glocker, A. Khamene, R. Larsen, N. Navab
Computing Minimal Deformations: Application to Construction of Statistical Shape Models.
IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR), Anchorage, Alaska (USA), June 24-26, 2008 (bib)
B. Glocker, N. Paragios, N. Komodakis, G. Tziritas, N. Navab
Optical Flow Estimation with Uncertainties through Dynamic MRFs
IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR), Anchorage, Alaska (USA), June 24-26, 2008 (bib)
C. Wachinger
Insights Into Three-Dimensional Ultrasound Mosaicing: Strategies for the alignment of multiple ultrasound volumes
VDM Verlag Dr. Müller, Stuttgart, ISBN: 3836488264, December 23 2008, Amazon (bib)
T. Wendler, T. Lasser, A. K. Buck, C. Özgür, M. Schwaiger, S. I. Ziegler, N. Navab
First in Vivo Use of a Fused Gamma Ultrasound System
Proceedings of RSNA 2008, Chicago, USA, December 2008 (bib)
J. Traub, T. Sielhorst, S.M. Heining, N. Navab
Advanced Display and Visualization Concepts for Image Guided Surgery
IEEE/OSA Journal of Display Technology; Special Issue on Medical Displays, Volume 4, Issue 4, Dec. 2008 (bib)
T. Sielhorst, M. Feuerstein, N. Navab
Advanced Medical Displays: A Literature Review of Augmented Reality
IEEE/OSA Journal of Display Technology; Special Issue on Medical Displays, Volume 4, Issue 4, Dec. 2008 (bib)
B. Glocker, N. Komodakis, G. Tziritas, N. Navab, N. Paragios
Dense Image Registration through MRFs and Efficient Linear Programming
Medical Image Analysis, Volume 12, Issue 6, December 2008, pp. 731-741 (bib)
C. Wachinger, W. Wein, N. Navab
Registration Strategies and Similarity Measures for Three-dimensional Ultrasound Mosaicing
Journal of the University Radiologists, Academic Radiology 15 (11), pp.1404-1415. Special issue of MICCAI 2007 (bib)
T. Reichl, J. Passenger, O. Acosta, O. Salvado
Real-time ultrasound simulation on GPU
CSIRO, Proceedings of CSIRO ICT Centre Conference 2008 (bib)
H. Yano, D. Deguchi, M. Feuerstein, T. Kitasaka, K. Mori, Y. Suenaga
A study on bronchial area extraction from 3D chest CT images using CT value distribution features
17th Meeting of the Japan Society of Computer Assisted Surgery, Tokyo, Japan, October/November 2008 (bib)
T. Sugiura, D. Deguchi, M. Feuerstein, T. Kitasaka, K. Mori, Y. Suenaga, K. Imaizumi, Y. Hasegawa
A study on a method for accelerating bronchoscope tracking based on image registration on GPU
17th Meeting of the Japan Society of Computer Assisted Surgery, Tokyo, Japan, October/November 2008 (bib)
X. Luo, M. Feuerstein, D. Deguchi, T. Kitasaka, Y. Suenaga, K. Imaizumi, Y. Hasegawa, K. Mori
A Study on Feature Point Extraction from Bronchoscopic Images for Bronchoscope Tracking
17th Meeting of the Japan Society of Computer Assisted Surgery, Tokyo, Japan, October/November 2008 (bib)
M. Feuerstein, D. Deguchi, T. Kitasaka, S. Iwano, K. Imaizumi, Y. Hasegawa, Y. Suenaga, K. Mori
Automatic Detection of Mediastinal Lymph Nodes in Contrast-Enhanced Chest CT
17th Meeting of the Japan Society of Computer Assisted Surgery, Tokyo, Japan, October/November 2008 (bib)
A. Roodaki, A. Taki, S.K. Setarehdan, N. Navab
Modified wavelet transform features for Characterizing different plaque types in IVUS images; A feasibility study
9th International Conference on Signal Processing (ICSP’08) Oct. 26-29 , 2008 , Beijing , CHINA (bib)
W. Wein, S. Brunke, A. Khamene, M.R. Callstrom, N. Navab
Automatic CT-Ultrasound Registration for Diagnostic Imaging and Image-guided Intervention
Medical Image Analysis 12(5), pp 577-585, October 2008 (bib)
M. Feuerstein, T. Reichl, J. Vogel, J. Traub, N. Navab
New Approaches to Online Estimation of Electromagnetic Tracking Errors for Laparoscopic Ultrasonography
Computer Aided Surgery, vol. 13, no. 5, pp. 311-323, September 2008 (bib)
W. Wein, J.-Z. Cheng, A. Khamene
Ultrasound based Respiratory Motion Compensation in the Abdomen
MICCAI 2008 Workshop on Image Guidance and Computer Assistance for Soft-Tissue Interventions, September 10 2008, New York City, USA. (bib)
R. Shams, R. Hartley, N. Navab
Real-Time Simulation of Medical Ultrasound from CT Images
Medical Image Computing and Computer-Assisted Intervention, MICCAI, 2008, New York, USA, September 6-10 2008 (bib)
E. Gassner, Razvan Ioan Ionasec, B. Georgescu, S. Vogt, U. J. Schoepf, D. Comaniciu
Performance of a Dynamic Aortic Valve Model for Quantification of the Opening Area at Cardiac MDCT . Comparison to Manual Planimetry
Radiological Society of North America, RSNA, 2008, Chicago, USA, November 2008 (bib)
Razvan Ioan Ionasec, B. Georgescu, D. Comaniciu, S. Vogt, U. J. Schoepf, E. Gassner
Patient Specific 4D Aortic Root Models Derived from Volumetric Image Data Sets
Radiological Society of North America, RSNA, 2008, Chicago, USA, November 2008 (bib)
Razvan Ioan Ionasec, B. Georgescu, E. Gassner, S. Vogt, O. Kutter, M. Scheuering, N. Navab, D. Comaniciu
Dynamic model-driven quantification and visual evaluation of the aortic valve from 4D CT
Medical Image Computing and Computer-Assisted Intervention, MICCAI, 2008, New York, USA, September 6-10 2008 (bib)
J. Choi, B. Georgescu, Razvan Ioan Ionasec, S. Raman, G. Hong, X. Liu, Helene Houle, M. A. Vannan
Novel Semi-Automatic Quantitative Assessment of The Aortic Valve and Aortic Root from Volumetric 3D Echocardiography: Comparison to Volumetric Cardiac Computed Tomography (CT)
AHA, New Orleans, USA, November 2008 (bib)
F. Bender, M. Groher, A. Khamene, W. Wein, H. Heibel, N. Navab
3D Dynamic Roadmapping for Abdominal Catheterizations
Medical Image Computing and Computer-Assisted Intervention, MICCAI, 2008, New York, USA, September 6-10 2008 (bib)
S. Atasoy, D. Noonan, S. Benhimane, N. Navab, G. Z. Yang
A Global Approach for Automatic Fibroscopic Video Mosaicing in Minimally Invasive Diagnosis
Medical Image Computing and Computer-Assisted Intervention, MICCAI, 2008, New York, USA, September 6-10 2008 (bib)
T. Reichl
Ultrasound Simulation Project Patent Landscape Search August 2008
CSIRO, The Australian e-Health Research Centre, Internal Report 2008/289 (bib)
A. Taki, Z.Najafi, A. Roodaki, S.K. Setarehdan, R. Zoroofi, A. Konig, N. Navab
Automatic segmentation of calcified plaques and vessel borders in IVUS images
International Journal of Computer Assisted Radiology and Surgery(CARS 2008) (bib)
C. Wachinger, R. Shams, N. Navab
Estimation of Acoustic Impedance from Multiple Ultrasound Images with Application to Spatial Compounding
IEEE Computer Society Conference on Computer Vision and Pattern Recognition, Anchorage, Alaska (USA), June 2008. Workshop on Mathematical Methods in Biomedical Image Analysis (MMBIA). (bib)
A. Taki, A. Roodaki, S.K. Setarehdan, P. Heider, N. Navab
Assessment of Automatic Classification of Artery Plaque Composition in IVUS Images Using Histology Correlation
22nd International Congress and Exhibition June 25 - 28, 2008, Barcelona, Spain (bib)
C. Unger, M. Groher, N. Navab
Image Based Rendering for Motion Compensation in Angiographic Roadmapping
IEEE Computer Society Conference on Computer Vision and Pattern Recognition, Anchorage, Alaska (USA), June 24-26, 2008 (bib)
N. Navab, J. Traub, A. K. Buck, S. I. Ziegler, T. Wendler
Navigated nuclear probes for intra-operative functional imaging
Proceedings of 5th IEEE International Symposium on Biomedical Imaging (ISBI 2008), Paris, France, May 14 - 17 2008, pp. 1395-1398 (bib)
R. Lasowski, S. Benhimane, J. Vogel, T. F. Jakobs, C. J. Zech, C. Trumm, M. Brokate, N. Navab
Adaptive visualization using the annealing M-estimator
Workshop Bildverarbeitung für die Medizin, Berlin, Germany, April 6-8, 2008 (bib)
M. Baumhauer, M. Feuerstein, H.P. Meinzer, J. Rassweiler
Navigation in Endoscopic Soft Tissue Surgery: Perspectives and Limitations
Journal of Endourology, vol. 22, no. 4, pp. 1-16, April 2008 (bib)
T. Reichl, J. Passenger, O. Acosta, O. Salvado
Transrectal Ultrasound and Biopsy Simulation Literature Review
CSIRO, The Australian e-Health Research Centre, Internal Report 2008/108 (bib)
M. Feuerstein, T. Mussack, S.M. Heining, N. Navab
Intraoperative Laparoscope Augmentation for Port Placement and Resection Planning in Minimally Invasive Liver Resection
IEEE Trans. Med. Imag., vol. 27, no. 3, pp. 355-369, March 2008 (bib)
A. Roodaki, Z.Najafi, A.Soltanzadi, A. Taki, S.K. Setarehdan, N. Navab
Detection of Outer Layer of the Vessel Wall and Characterization of Calcified Plaques in IVUS Images
13th Int'l CSI Computer Conference, CSICC'08, Kish Island, Iran, March 2008. (bib)
O. Pauly, G. Unal, G. Slabaugh, S. Carlier, T. Fang
Semi-Automatic Matching of OCT and IVUS Images For Image Fusion
SPIE Medical Imaging, San Diego, California (USA), February 2008. (bib)
R. Lasowski, S. Benhimane, J. Vogel, T. F. Jakobs, C. J. Zech, C. Trumm, Ch. Clason, N. Navab
Adaptive visualization for needle guidance in RF Liver Ablation: taking organ deformation into account
SPIE Medical Imaging, San Diego, California, USA, February 16-21, 2008 (bib)
W. Wein, A. Khamene
Image-Based Method for In-Vivo Freehand Ultrasound Calibration
SPIE Medical Imaging, 16-21 February 2008, San Diego, California USA (bib)
O. Kutter, S. Kirchhoff, M. Berkovic, M. Reiser, N. Navab
Spatio-temporal registration in multiplane MRI acquisitions for 3D Colon Motiliy analysis
SPIE Medical Imaging, San Diego, California, USA, 16-21 February 2008 (bib)
C. Wachinger, N. Navab
Ultrasound Specific Similarity Measures for Three-Dimensional Mosaicing.
SPIE Medical Imaging, San Diego, California, USA, 16-21 February 2008 (bib)
M. Feuerstein
Augmented Reality in Laparoscopic Surgery - New Concepts and Methods for Intraoperative Multimodal Imaging and Hybrid Tracking in Computer Aided Surgery
Book, ISBN 978-3-8364-7783-3, Vdm Verlag Dr. Müller. (bib)
N. Navab, M. Groher
Novel Navigation and Advanced Visualization Techniques for Abdominal Catheterization
Hospital Imaging and Radiology Europe, 2 (4), pp. 29-30, Feb. 2008 (bib)
T. Lasser, A. Soubret, J. Ripoll, V. Ntziachristos
Surface Reconstruction for free-space 360° Fluorescence Molecular Tomography and the effects of animal motion
IEEE Transactions on Medical Imaging 2008, 27(2):188-194 (bib)
M. Blume, M. Rafecas, S. I. Ziegler, N. Navab
Combined Motion Compensation and Reconstruction for PET
Proc. IEEE Nuclear Science Symposium and Medical Imaging Conference, Dresden, Germany, October 2008 (bib)
2007
B. Glocker, S. Buhmann, C. Kirchhoff, T. Mussack, M. Reiser, N. Navab
Towards a Computer Aided Diagnosis System for Colon Motility Dysfunctions
SPIE Medical Imaging, San Diego, California, USA, 17-22 February 2007 (bib)
A. Besbes, N. Komodakis, B. Glocker, G. Tziritas, N. Paragios
4D Ventricular Segmentation and Wall Motion Estimation Using Efficient Discrete Optimization
3rd International Symposium in Visual Computing, (ISVC), Lake Tahoe, Nevada/California, USA, November 26-28 2007. (bib)
W. Wein, A. Khamene, D.-A. Clevert, O. Kutter, N. Navab
Simulation and Fully Automatic Multimodal Registration of Medical Ultrasound
Medical Image Computing and Computer-Assisted Intervention (MICCAI 2007), Brisbane, Australia, October 2007. Received the MICCAI 2007 Young Scientist Award. (bib)
W. Wein, M. Blume, U. Leischner, H.-U. Dodt, N. Navab
Quality-based Registration and Reconstruction of Optical Tomography Volumes
Medical Image Computing and Computer-Assisted Intervention (MICCAI 2007), Brisbane, Australia, October 2007 (bib)
T. Wendler, M. Feuerstein, J. Traub, T. Lasser, J. Vogel, F. Daghighian, S. I. Ziegler, N. Navab
Real-time fusion of ultrasound and gamma probe for navigated localization of liver metastases
Proceedings of Medical Image Computing and Computer-Assisted Intervention (MICCAI 2007), Brisbane, Australia, October 29 - November 2007, LNCS 4792 (2), pp. 909-917 (bib)
T. Wendler, A. Hartl, T. Lasser, J. Traub, F. Daghighian, S. I. Ziegler, N. Navab
Towards intra-operative 3D nuclear imaging: reconstruction of 3D radioactive distributions using tracked gamma probes
Proceedings of Medical Image Computing and Computer-Assisted Intervention (MICCAI 2007), Brisbane, Australia, October 29 - November 2 2007, LCNS 4792 (2), pp. 252-260 (bib)
C. Wachinger, W. Wein, N. Navab
Three-Dimensional Ultrasound Mosaicing
Medical Image Computing and Computer-Assisted Intervention, MICCAI, 2007, Brisbane, Australia, October 29 - November 2 2007 (bib)
M. Groher, F. Bender, R.T. Hoffmann, N. Navab
Segmentation-driven 2D-3D Registration for Abdominal Catheter Interventions
Medical Image Computing and Computer-Assisted Intervention, MICCAI, 2007, Brisbane, Australia, October 29 - November 2 2007, LNCS 4792, pp. 527-535 (bib)
B. Glocker, N. Komodakis, N. Paragios, Ch. Glaser, G. Tziritas, N. Navab
Primal/Dual Linear Programming and Statistical Atlases for Cartilage Segmentation
Medical Image Computing and Computer-Assisted Intervention (MICCAI), Brisbane, Australia, October 29 - November 2 2007 (bib)
M. Blume, D. Zikic, W. Wein, N. Navab
A New and General Method for Blind Shift-Variant Deconvolution of Biomedical Images
Medical Image Computing and Computer-Assisted Intervention (MICCAI 2007), Brisbane, Australia, October 2007 (bib)
M. Feuerstein
Augmented Reality in Laparoscopic Surgery - New Concepts for Intraoperative Multimodal Imaging
PhD Thesis. The original (high-resolution) publication is available online at mediatum.ub.tum.de (bib)
C. Wachinger, W. Wein, N. Navab
Ultrasound Volume Stitching
6. Jahrestagung der Deutschen Gesellschaft für Computer-und Roboter-Assistierte Chirurgie (CURAC 2007), Karlsruhe, Germany, October 2007 (bib)
N. Navab, J. Traub, T. Sielhorst, M. Feuerstein, C. Bichlmeier
Action- and Workflow-Driven Augmented Reality for Computer-Aided Medical Procedures
IEEE Computer Graphics and Applications, vol. 27, no. 5, pp. 10-14, Sept/Oct, 2007 (bib)
Z.Najafi, A. Taki, S.K. Setarehdan, R. Zoroofi, A. Konig, N. Navab
A new method for automatic border detection in IVUS images and 3D visualization of segmented frames
The 4th Visual Information Engineering 2007 Conference: VIE 2007, London, July 2007. (bib)
M. Feuerstein, T. Mussack, S.M. Heining, N. Navab
Registration-free Laparoscope Superimposition for Intra-Operative Planning of Liver Resection
3rd Russian-Bavarian Conference on Biomedical Engineering, Erlangen, Germany, July 2/3 2007 (bib)
T. Lasser, V. Ntziachristos
Optimization of 360° projection fluorescence molecular tomography
Medical Image Analysis 2007, 11(4):389-399 (bib)
O. Kutter, S. Kettner (=Demirci), E.U. Braun, N. Navab, R. Lange, R. Bauernschmitt
Towards an Integrated Planning and Navigation System for Aortic Stent-Graft Placement
Proc. of Computer Assisted Radiology and Surgery (CARS), Berlin, Germany, June 2007. (bib)
T. Lasser, N. Deliolanis, A. Soubret, J. Ripoll, V. Ntziachristos
360° free space Fluorescence Molecular Tomography using silhouette surface reconstruction
SPIE 2007 European Conferences on Biomedical Optics, Munich, Germany, June 17-21, 2007 (bib)
A. Martinez-Möller, R. Bundschuh, , N. Navab, S. I. Ziegler, M. Schwaiger, S. Nekolla
Comparison of Respiratory Sensors and its Compliance for Respiratory Gating in Emission Tomography
Journal of Nuclear Medicine 2007, 48 (suppl. 2), p426. Proceedings of Annual Meeting of Society of Nuclear Medicine (SNM), held in Washington D.C., USA, June 2007 (bib)
A. Martinez-Möller, M. Souvatzoglou, R. Botnar, N. Navab, S. I. Ziegler, M. Schwaiger, S. Nekolla
An approach for MR-based attenuation correction for combined MR/PET: effects of ignoring bones
Journal of Nuclear Medicine 2007, 48 (suppl. 2), p156. Proceedings of Annual Meeting of Society of Nuclear Medicine (SNM), held in Washington D.C., USA, June 2007 (bib)
A. Martinez-Möller, R. Bundschuh, N. Navab, S. I. Ziegler, M. Schwaiger, S. Nekolla
Determination of Body Surface Area from a whole-body CT scan and its impact for SUV normalization
Journal of Nuclear Medicine 2007, 48 (suppl. 2), p44. Proceedings of Annual Meeting of Society of Nuclear Medicine (SNM), held in Washington D.C., USA, June 2007 (bib)
W. Wein, B. Röper, N. Navab
Integrating diagnostic B-mode ultrasonography into CT-based radiation treatment planning
IEEE Transactions on Medical Imaging, 26 (June 2007), pp. 866–879 (bib)
A. Taki, Z.Najafi, S.K. Setarehdan, N. Navab, R. Zoroofi
A new automatic border detection method for lumen and mediaadventitia boundaries in IVUS images
June.2007, Proceedings of 21st International Congress of Computer Assisted Radiology and Surgery (CARS 2007), Berlin, Germany. (bib)
L. König, M. Groher, A. Keil, Ch. Glaser, M. Reiser, N. Navab
Semi-Automatic Segmentation of the Patellar Cartilage in MRI
Proc. of Bildverarbeitung für die Medizin (BVM 2007), Munich, Germany, March 2007. The original publication is available online at www.springerlink.com. (bib)
O. Kishenkov, T. Wendler, J. Traub, S. I. Ziegler, N. Navab
Method for projecting functional 3D information onto anatomic surfaces: Accuracy improvement for navigated 3D beta-probes
Proceedings of Bildverarbeitung fuer die Medizin (BVM 2007), Munich, Germany, March 2007, pp.66-70 (bib)
N. Navab, M. Feuerstein, C. Bichlmeier
Laparoscopic Virtual Mirror - New Interaction Paradigm for Monitor Based Augmented Reality
Virtual Reality, Charlotte, North Carolina, USA, March 10-14, 2007 (bib)
R. Micu = (Lasowski), T. F. Jakobs, C. J. Zech, N. Navab
Evaluation of different subvolume visualizations in CT-Fluoroscopy guided RF Liver Ablation
SPIE Medical Imaging, San Diego, California, USA, 17-22 February 2007 (bib)
M. Feuerstein, T. Mussack, S.M. Heining, N. Navab
Registration-Free Laparoscope Augmentation for Intra-Operative Liver Resection Planning
SPIE Medical Imaging, San Diego, California, USA, 17-22 February 2007 (bib)
A. Martinez-Möller, M. Souvatzoglou, N. Navab, M. Schwaiger, S. Nekolla
Artifacts from Misaligned CT in Cardiac Perfusion PET/CT Studies: Frequency, Effects, and Potential Solutions
Journal of Nuclear Medicine 2007;48:188-193. (bib)
N. Deliolanis, T. Lasser, D. Hyde, A. Soubret, J. Ripoll, V. Ntziachristos
Free-space fluorescence molecular tomography utilizing 360° geometry projections
Optics Letters 32(4):382-384, January 2007 (bib)
2006
A. Keil, C. Wachinger, G. Brinker, S. Thesen, N. Navab
Patient Position Detection for SAR Optimization in Magnetic Resonance Imaging
Proc. of Medical Image Computing and Computer-Assisted Intervention (MICCAI 2006), Copenhagen, Denmark, October 2006. The original publication is available online at www.springerlink.com. (bib)
W. Wein, F. Pache, B. Röper, N. Navab
Backward-Warping Ultrasound Reconstruction for Improving Diagnostic Value and Registration
Proceedings of Medical Image Computing and Computer-Assisted Intervention (MICCAI 2006), Copenhagen, Denmark, October 2006 (bib)
A. Martinez-Möller, W. Howe, M. Schwaiger, S. Nekolla
Motion Free Images by Dual Gating of PET Listmode Acquisitions
World Congress of Cardiology, held in Barcelona, Spain, September 2006 (bib)
N. Deliolanis, T. Lasser, M. Niedre, A. Soubret, V. Ntziachristos
In-vivo Lung Cancer Imaging in Mice using 360° Free-space Fluorescence Molecular Tomography
IEEE 2006 International Conference of the Engineering in Medicine and Biology Society, New York City, USA, August 30 - September 3, 2006 (bib)
B. Röper, W. Wein, P. Kneschaurek, M. Molls, M. Dobritz, N. Navab
Image-based fusion of diagnostic ultrasound and planning CT for radiotherapy of head and neck cancer – a way towards improvement of regional target volume delineation
12. Jahreskongress der Deutschen Gesellschaft für Radioonkologie (DEGRO), May 2006, Dresden, Germany (bib)
T. Lasser, V. Ntziachristos
Surface Reconstruction from Contours for Non-contact Fluorescence Molecular Tomography
Biomedical Optics Topical Meeting (Optical Society of America), Fort Lauderdale, USA, March 19 - 22, 2006. (bib)
A. Khamene, P. Bloch, W. Wein, M. Svatos, F. Sauer
Automatic Registration of Portal Images and Volumetric CT for Patient Positioning in Radiation Therapy
Medical Image Analysis 10 (2006), pages 96-112 (bib)
A. Khamene, R. Chisu, W. Wein, N. Navab, F. Sauer
A Novel Projection Based Approach for Medical Image Registration
Third International Workshop on Biomedical Image Registration (WBIR), 9-11 July 2006, Utrecht, The Netherlands. (bib)
2005
W. Wein, B. Röper, N. Navab
Automatic Registration and Fusion of Ultrasound with CT for Radiotherapy
8th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI), October 2005, Palm Springs, California USA. (bib)
W. Wein, B. Röper, N. Navab
2D/3D Registration Based on Volume Gradients
SPIE Medical Imaging, 12-17 February 2005, San Diego, California USA (bib)
2004
W. Wein, B. Röper, N. Navab
2D/3D Registration Based on Volume Gradients
CURAC, October 2004, Munich (bib)

Working Group

Ahmadi
Ahmad Ahmadi
Albarqouni
Shadi Albarqouni
Baur
Christoph Baur
Bieth
Marie Bieth
Coskun
Huseyin Coskun
Das
Dhritiman Das
Demiray geb. Lentes?
Beatrice Demiray geb. Lentes?
Demirci
Stefanie Demirci
Esposito
Marco Esposito
Esteban
Javier Esteban
Göbl?
Rüdiger Göbl?
Hennersperger
Christoph Hennersperger
Lasser
Tobias Lasser
Liu
Xin Liu
Matthies
Philipp Matthies
Molina Romero
Miguel Molina Romero
Okur Kuru
Aslı Okur Kuru
Page
Josue Page
Rackerseder
Julia Rackerseder
Stefan
Philipp Stefan
Zahnd
Guillaume Zahnd



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